| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1122 |
|---|
| Symbol | |
|---|
| ID | 4924290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1297772 |
|---|
| End bp | 1298050 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640162657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001093252 |
|---|
| Protein GI | 127512055 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2924] Fe-S cluster protector protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000145882 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTA CAGTGAACTG CCAGTATCTT AAGAAAGAGG CAGACGGCCT AGCCTTTCAG
CTCTACCCGG GTGAACTCGG TAAGCGAATT TTTGACAACA TCAGCCAGGA AGCCTGGTCG
CTCTGGCAGG CCAAGCAGAC CATGCTGATC AATGAGAAGA AACTCAACAT GATGAATGTT
GACGATCGCA AGTTCCTCGA AGAGCAGATG GTTAACTTCC TGTTTGAGGG CAAAGAGGTC
GAGATCGAAG GCTATGTGCC GCAAAAAGAT GACGAGTAA
|
|---|
| Protein sequence | MARTVNCQYL KKEADGLAFQ LYPGELGKRI FDNISQEAWS LWQAKQTMLI NEKKLNMMNV
DDRKFLEEQM VNFLFEGKEV EIEGYVPQKD DE
|
|---|
| |