| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1117 |
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| Symbol | |
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| ID | 4921047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1291843 |
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| End bp | 1292973 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162650 |
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| Product | N-acetylglucosamine-6-phosphate deacetylase |
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| Protein accession | YP_001093247 |
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| Protein GI | 127512050 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0425405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAGA CACTGATTGC CGAGCGAGTA TTTGACGGCG AACACTTCCA CCATAACCAG
GCCATCACCA TAGAGGACGG GCGTATCGTC TCTTTCGATA GGGCTAGCGA TGTCGAGCCG
ATTCTGCTGG CCGGCACCCT GGTGCCTGGC TTTATCGATG TTCAGGTCAA TGGCGGCGGC
GGTGCCCTGT TTAACGACGC ACCCAGCGTC GAGAAGATAA AGACCATAGG CCAGGCCCAT
GCCAGATTTG GCACCACGGG CTTCCTGCCG ACCCTGATCA CCGACGAAAT TGAGGTGATG
CGCGCCGCCG CCGATGCGGT GGCCGAGGCG CTGGCGCTGA ATACGCCAGG CGTGCTGGGG
ATCCATTTCG AGGGGCCGCA TCTCAGCGTG CCCAAGAAGG GTGTCCATCC GGCCAATTAT
ATTCGTCGTA TCTCTGATGA AGAGCTGGCG GTTTTTGCCC GTAATGATCT GGGGACTAAG
GTGGTGACAC TGGCGCCTGA GAACGTCGCA CCAGAGGTGA TTCATGCCCT GGTCGAGTGC
GGCGTCAGGG TTTGTCTCGG TCACTCTAAT GCCGACTATG ACACTGTTAT TAAGGCGCTT
GAGGCCGGGG CAACCGGTTT TACCCACCTG TTTAACGCCA TGTCGCCCAT GGATTCCAGG
GCGCCGGGCA TGGTGGGCGC GGCGCTGGAG AGCCAGGATG CCTGGTGCGG CCTGATTGTC
GATGGTCACC ACGTGCATCC GGCCTCGGCT AAGGTAGCCA TCGCCGCTAA GCCAAGGGGC
AAGGTGATGC TGGTGACAGA CGCCATGCCG CCTGTGGGCA TGGATGATAA CGCCAGCTTC
GAGCTGTTTG GCACCCAGGT GGTGCGCCGC GGTGACAGGT TAAATGCCGT AACCGGCGAG
CTTGCCGGAT GCGTGCTGGA TATGATTGGT GCGGTCAACA ACAGCGTTAG CATGCTAGGC
GTGGCCCACG AAGAGGCGCT GCGGATGGCG GCTAGATATC CTGCCGAGTT TATCGGTCAT
CGTCAGCGCG GAGTGTTTAC CATAGGCGCC AGGGCGGATA TGGTGTTGCT GGGCAGCGAT
AATCAAGTGG CGCGCACCTA CATAGATGGC CAGTTGGTCT ATCAGGCATA G
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| Protein sequence | MKQTLIAERV FDGEHFHHNQ AITIEDGRIV SFDRASDVEP ILLAGTLVPG FIDVQVNGGG
GALFNDAPSV EKIKTIGQAH ARFGTTGFLP TLITDEIEVM RAAADAVAEA LALNTPGVLG
IHFEGPHLSV PKKGVHPANY IRRISDEELA VFARNDLGTK VVTLAPENVA PEVIHALVEC
GVRVCLGHSN ADYDTVIKAL EAGATGFTHL FNAMSPMDSR APGMVGAALE SQDAWCGLIV
DGHHVHPASA KVAIAAKPRG KVMLVTDAMP PVGMDDNASF ELFGTQVVRR GDRLNAVTGE
LAGCVLDMIG AVNNSVSMLG VAHEEALRMA ARYPAEFIGH RQRGVFTIGA RADMVLLGSD
NQVARTYIDG QLVYQA
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