Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1096 |
Symbol | rpsT |
ID | 4923464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1263964 |
End bp | 1264230 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640162629 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001093226 |
Protein GI | 127512029 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000700681 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0325702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAACG TCGTCAGCAC AACGCTAGCC GTCGTTCTAT GCTACGTTCT TACGTTAAGA AAGTAATCGC TGCGATCAAC ACTGGCGATC ACAAAGCGGC AACTGAAGCA TTCAATGCTG CACAACCAAT TGTTGACCGT ATGGCGACTA AAGGTCTTAT TCACAAGAAT AAAGCTGCCC GTCATAAGGC TCGTCTAAAC GCTAAGATCA AAGCACTAGC TGCTTAA
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Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRS YVKKVIAAIN TGDHKAATEA FNAAQPIVDR MATKGLIHKN KAARHKARLN AKIKALAA
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