| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1091 |
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| Symbol | |
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| ID | 4920600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1256548 |
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| End bp | 1258914 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640162624 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_001093221 |
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| Protein GI | 127512024 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00166256 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0504216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC AGCAAGAGAT CACCGCACTA AAGAAATTTG TAAGAGCGAC CAACTTCCTG
GCCACCTCGC AAATCTACCT TAAGCAGAAC GTACTGCACA AGCGTCCGCT AGAGCATAGC
GACATCAAAC CCAGACTGCT AGGGCACTGG GGTACTTGTC CAGGTATCAA CTTCGTCTAC
GCTAACGTCA ACCGTCTCAT CAAGAAAACC AACCGTCCTT TCCTCTACCT TGTCGGCCCA
GGCCATGGCT TCCCAGCCGT ACAAGCTAAC CTGTTTATGG AAGGATCTTT GAGTCATTTC
TATCCAGAGA CGATTCCGTA CAACGAGACA GGTATCGAAG ATATCTGTAA GAAATTTTCA
GCCGCCTATG GCTACCCTTC TCACGCTAAC CCAGAAGCAC CGGGTCAGAT CCTCGAAGGT
GGTGAGCTAG GTTACTCGCT CTCAGTTGCT TGGGGTGCAG TACTGGATAA CCCTAACCTC
ATCGCTACCG TACTTATTGG TGACGGCGAA TCAGAAACCG GCCCACTGGC AGCCTCTTGG
TATGCTAACC GTCTGGTATC TCCAGCCAAC AACGGTGCCG TACTGCCAAT CGTTCACATC
AACGGCTACA AGATCTCTGG CCCAACCCGT ATGGGACGCA TGAGCCACGA AGAACTTGAG
CTTGAATTTA AAGGCCTTGG CTACCACCCA ATCATTGTCG ACAGCGACCT TGAAGAAGAT
GTCTACGTGC AGATGACCAA AGCGATGGAT GAATCCTATG CCATGATCGA AGCCATTCAG
ACCAAGGCAC GTAGCGGCGA AGATGTCGTT AAGCCTCGCT GGCCAGTGAT TCTGATGCGC
ACCGCAAAAG GTTGGACAGG CGTTGCCGAA GACAATGGTA AGAAACTAGA AGGCAACTGT
GAATCGCACC AAGTTATCGT TAACAAGTGT GCGAAAGACA AACAACACCT TGAAGCCTTA
GATCAATGGC TTGCCAGCTA CAAGTTCAAC GAACTTTATA GCATCAACGA GCAAAACCAG
ATCGTGTTCG ACAAAGACAT TCAATCATTG CTCCCACCAA AAGAGCTTTG CTGTGGTCGT
CAACACCTGA GCTATGGCGG CGAAGTGGTT CGTTCACTGA ACAATCCTAA GCTGGAAGAC
CTGGCCTACG GTGCAGAAAC GCCTAGAGGC CAACGTGGTT ACTCTATGCT GAAGATGGGT
CAATGGATGC GTGATGCATT CAAGCTCAAC AGAGACCAAC GCAACCTGCG TATCTTCAGC
CCTGACGAAA CCTACTCTAA CCAGCTGCAA GCTGTGTTTG AAGAGACAGA TCGTGCATGG
CAATGGCCTA TCGAAAGCTG GGACGAAGAT ATGTCTCGCG ACGGTCGCGT ACTTGAGCTG
CTATCTGAGA ACCTGCTGTT CGGCATGCTA CACGGCTACA CAGTAACGGG TCGTCACGGC
ATGTTCCCAA CTTATGAGTC ATTCTCACAG GTGGTCTCCT CTATGGCAGA CCAATACTGT
AAGTATGTCT ATGCGAGCCA AGGCGTACAC TTCCGTAAGC CAGTGCCCGC TTGTAACGTC
GTGCTCTCTT CACTGCTGGA GCGCCAAGAC CACAACGGTT ATTCTCACCA GAACCCTTCT
TTCCTAGGGG CTATGCTTGA GAAACACCCA GAGATCATCT CGGCTTATCT GCCAGCAGAT
GCTAACTCGA CACTGGTTTA CACAGAGCGT GCCTTCGCCG ATCGCGATAA ACTCAACATC
ATCGCCGCCG GTAAGAAAGA GTTGCCACAA TGGCTAACTT TGGACGAAGC CCGTCAACAG
GCTAAAGATG GTGTCATGGT GTGGGACTTC GCCTCAGATG AAAACCCAGA CGTAGTACTG
GCAGGCTGTG GTGACTATGT GACCCAGGAA TGTATGGCCT CCCTGGTCAT CCTGCGTGAA
CTACTACCAA GAGTCCGCGT CCGCTTCGTC AGCGTAACCG AGCTAACCAG CAGCGGTCTG
GGTAGCCGTA AGTTCCAAAG CAAGCCTTGG ATGATGGATG AGATCTTCAC CGCCGATAAG
GGTGTGGTCT TCAACTACCA CGGTTATCCA AACACCATCA AGAAACTGGT ATTCGATTAC
AAAGGTAGCC ACAGATTCCG CATCAAGGGC TATGAAGAGG AAGGTTCAAC CACTACGCCA
TTCGACATGG GTGTGCGCAA CGGTACTTCT CGCTACCACC TGGTTATCGA TATGGCTTAC
AAGCTATTCC AACAAGGTGT GATCGACGAG ACACAACACG TTGCCATCAC CACTGACATG
CTACAACGTC TGGTTGACCA CCGTAACTAC ATCAAGGCAA ACGGTGTCGA CCCAGAAAAC
ATCGAAAACT GGATCTGGAC ACGTTAA
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| Protein sequence | MSQQQEITAL KKFVRATNFL ATSQIYLKQN VLHKRPLEHS DIKPRLLGHW GTCPGINFVY
ANVNRLIKKT NRPFLYLVGP GHGFPAVQAN LFMEGSLSHF YPETIPYNET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVA WGAVLDNPNL IATVLIGDGE SETGPLAASW
YANRLVSPAN NGAVLPIVHI NGYKISGPTR MGRMSHEELE LEFKGLGYHP IIVDSDLEED
VYVQMTKAMD ESYAMIEAIQ TKARSGEDVV KPRWPVILMR TAKGWTGVAE DNGKKLEGNC
ESHQVIVNKC AKDKQHLEAL DQWLASYKFN ELYSINEQNQ IVFDKDIQSL LPPKELCCGR
QHLSYGGEVV RSLNNPKLED LAYGAETPRG QRGYSMLKMG QWMRDAFKLN RDQRNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDED MSRDGRVLEL LSENLLFGML HGYTVTGRHG
MFPTYESFSQ VVSSMADQYC KYVYASQGVH FRKPVPACNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP EIISAYLPAD ANSTLVYTER AFADRDKLNI IAAGKKELPQ WLTLDEARQQ
AKDGVMVWDF ASDENPDVVL AGCGDYVTQE CMASLVILRE LLPRVRVRFV SVTELTSSGL
GSRKFQSKPW MMDEIFTADK GVVFNYHGYP NTIKKLVFDY KGSHRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGVIDE TQHVAITTDM LQRLVDHRNY IKANGVDPEN
IENWIWTR
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