| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1088 |
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| Symbol | pgi |
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| ID | 4923575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1252316 |
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| End bp | 1253953 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162621 |
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| Product | glucose-6-phosphate isomerase |
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| Protein accession | YP_001093218 |
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| Protein GI | 127512021 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0166] Glucose-6-phosphate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000310593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0429778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC TTACTCAGCA AGACGCATGG GCCCAGCTCG AGGCACAAGC CGCGAAGCTG
CCACACATGC GCGAGCTATT TGAGGCCGAT CCCCAGCGCT TTGACAAGAT GTCACTGTCC
GCCTGCGGCC TGCTGCTGGA CTACTCCAAG AACCGGGCGG ATGAGCAGAC GCTTGAGCAG
CTGTTTAAAC TGGCTAAATC TGCCGGTCTA AGCGATAAGA TCCACGCCAT GTTCGATGGC
GAGATCATCA ACAACACCGA AAAGCGCGCC GTGCTGCACA CGGCCCTCAG AGCCGAGGCC
GACGAGGTTA TTTTGGTCGA TGGCCAGAAT ATCGTTCCCG AGGTAAAACA GACTCAGGCC
AAGATGGCCA AATTTGTCGA GGCAGTCACC TCTGGCGAGT GGAAGGGCTA CACGGGCAAG
GCGATCACAG ATATCGTGAG CATAGGCATT GGTGGCTCCT TCCTGGGCCC TAAGATAGTT
ACTCAGGCCC TGAGACCATA CTGGAATCCG GCGCTCAAGT GTCACTTTGT CGCCAACGTC
GATGCCACCT CACTGTGTGA GAAGCTGCGT CTGGTGGATC CGGAAACCAC ACTATTCGTG
ATGTCGTCTA AGTCTTTTGG CACCCAAGAG ACGCTGACCA ACACCCTGAG TGCCAAGGCC
TGGTTCCTGA AAAATGGCGG TACCCAAGTA GACATCGCCA AGCATTTCGT TGCCGTCACC
TCAAACGTGG CCAAGGCGAC CGAATTCGGC ATGGATGCGG ACAACATCTT CCCTATGTGG
GATTGGGTGG GCGGTCGTTA TTCACTCTGG TCGGCCATAG GTCTGCCTAT CGCCCTGTTG
ATCGGTATGG ATAACTTCTA CCAGCTGCTG GCGGGCGCCA AGTCGATGGA CAAGCATTTT
GTCGAGGCAC CGCTCGAACA GAATATGCCG GTGATCATGG GGCTGTTTTC CCTGCTCTAT
GGCAACTTCT ACCAGGCGCA GTCCCATGTG GTATTGACCT ATGATCATTA CCTCAGAGGC
CTGCCGGCGT ACTTCCAACA GCTGGACATG GAGAGTAACG GTAAATCTGT CACCCTCAAT
GGCGACAACG TCGACCATGC AACCGGCCCT GTGATCTGGG GCGGCGAAGG CACCAATGGT
CAACACGCCT ATCACCAGTT GTTACACCAA GGCACGGCAC TGATCCCGGC AGACTTTATT
CTGCCACTGC AGAGCCATAA CCCGCTCGGC GAACATCATG TGCAGCTGGC CTCCAACTGT
TTTGGCCAGA CTCAGGCACT GATGCAAGGC AGAACCTTCG ATGAGGCACT CGCCGAACTC
GACGGCAGCT CACAGAGCCA GGAAGAGAAG GCACTGATCG CTAAGCACAA GGTGATGGAA
GGCAATAAGC CAAGCAACAC CCTGCTGATG GACAAGCTGA CTCCGGAAAC TCTGGGTGCC
TTGATCGCCC TGTACGAGCA TAGAACCTTC GTTCAAGGCG CGATATGGGA CATCAACTCC
TTCGACCAAT GGGGCGTCGA ACTGGGCAAG ACCCTAGGCA ACGATGTGCT CGCACGTCTG
CAGAGCGATG AAGAGGCTAA GGCGCTAGAC GCCTCCAGCA ACGCCCTCAT CAATCTCTTT
AGACGCGGCC ACCTTTAA
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| Protein sequence | MTKLTQQDAW AQLEAQAAKL PHMRELFEAD PQRFDKMSLS ACGLLLDYSK NRADEQTLEQ
LFKLAKSAGL SDKIHAMFDG EIINNTEKRA VLHTALRAEA DEVILVDGQN IVPEVKQTQA
KMAKFVEAVT SGEWKGYTGK AITDIVSIGI GGSFLGPKIV TQALRPYWNP ALKCHFVANV
DATSLCEKLR LVDPETTLFV MSSKSFGTQE TLTNTLSAKA WFLKNGGTQV DIAKHFVAVT
SNVAKATEFG MDADNIFPMW DWVGGRYSLW SAIGLPIALL IGMDNFYQLL AGAKSMDKHF
VEAPLEQNMP VIMGLFSLLY GNFYQAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSVTLN
GDNVDHATGP VIWGGEGTNG QHAYHQLLHQ GTALIPADFI LPLQSHNPLG EHHVQLASNC
FGQTQALMQG RTFDEALAEL DGSSQSQEEK ALIAKHKVME GNKPSNTLLM DKLTPETLGA
LIALYEHRTF VQGAIWDINS FDQWGVELGK TLGNDVLARL QSDEEAKALD ASSNALINLF
RRGHL
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