| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1080 |
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| Symbol | |
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| ID | 4924068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1244163 |
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| End bp | 1245113 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162613 |
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| Product | homoserine kinase |
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| Protein accession | YP_001093210 |
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| Protein GI | 127512013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.708816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.284936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAA CGGTTTATGC GCCGGCCTCT ATGGGTAACG TCGGAGTCGG CTTCGATCTG
CTGGGCGCCG CCTTGGCACC TGTTGATGGC TGCCTTCTCG GCGATCGCGT CGCCATTGAA
TCTGCGCCCC ATGGCGTCTC GCTCAGTCTG GCCGGTCATT GGGCCGACAA GTTACCGGCG
GCCAGCGAAG AGAATATTGT CTACCAATGT GCGACCTTCT TTCTCGAGCA GCTAGGGAGC
CGCGCCGGCG TAGCCATGAC CTTAGAGAAG AACCTGCCGG TGGGCAGCGG CCTTGGCTCC
AGTGCCAGCT CTGTGGTCGC CGCCCTGTAC GCCCTGAACG AGCATTTCGA CAGGCCCTAT
GATAGCGACG CCTTGCTAAG GCTGATGGGG GAGTTTGAGG GCAAGATCAG CGGCTCGGTC
CACTATGATA ATGTGGCGCC CTGTTACCTT GGTGGCATGC AGCTGATGCT GGATACCCCT
AGCGCCGTGT GTCAGGGCCT GCCCGTATTT AAAGACTGGT ATTGGGTCGT GGCTTATCCT
GGGATCTCCC TGTCGACCGC TAAGATGCGG GCCCTGCTGC CGGCGCAGTA TGATAAGTCG
GTGGCGATCG ATTTTGGCCG TTATTTGAGC GCATTCGTAC ACGCCAGTTA TCGTCAGGAT
GCCAAGCTGG CCATAGAGGT ATTAAAAGAT GTGCTGGCCG AACCTTACCG CGCCTCGGAA
ATTCCCGGCT ATGAGCAGGC GCGAGCGGCC TTAGATGAGC TTGGCATGGC CACTACGGGG
ATCTCGGGCA GTGGCCCCAC GCTGTTCTCC GTGACAGATA ACCTGGAGAC GGCTAACAAG
GCCAAGGCCT GGCTGGATGC AAACTATGTT ACCTCCGGCT CGGGTTTTTC CCATATATGT
CAAATCGATA TGCTCGGCAC GCGCCGTGTA GATGCAGCAA TTTTAGATTA A
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| Protein sequence | MSLTVYAPAS MGNVGVGFDL LGAALAPVDG CLLGDRVAIE SAPHGVSLSL AGHWADKLPA
ASEENIVYQC ATFFLEQLGS RAGVAMTLEK NLPVGSGLGS SASSVVAALY ALNEHFDRPY
DSDALLRLMG EFEGKISGSV HYDNVAPCYL GGMQLMLDTP SAVCQGLPVF KDWYWVVAYP
GISLSTAKMR ALLPAQYDKS VAIDFGRYLS AFVHASYRQD AKLAIEVLKD VLAEPYRASE
IPGYEQARAA LDELGMATTG ISGSGPTLFS VTDNLETANK AKAWLDANYV TSGSGFSHIC
QIDMLGTRRV DAAILD
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