Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1079 |
Symbol | thrA |
ID | 4923784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1241698 |
End bp | 1244166 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162612 |
Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
Protein accession | YP_001093209 |
Protein GI | 127512012 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.555098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAA TGAAGTTCGG TGGTACCTCG CTGGCCAATT GGCAGAGGTT TAATAGTGCG GCGCAAATCG TCTTGGCTTC GGCCGCAGAG CAGCCGACGG CAGTGGTATT AAGCGCCCCG GCAACCGTGA CCAACGGTTT GCTGGAGATG GTCGACCTGG CGGTGGCCGG AGATGATTTC TTTCCAGTCT TGAGTCAGGT GCATGAGGTC TTTAAGACTC TCTATGGCCA AGCGGCCAGC GAGGTGCTGA GCGGCGAGCA ATCCGATAGC CTAGAAGCTG TTCTGGCGGC GCAGCTAAAG CACTGGCAAG ACAAGCTACA AGGCGTAGTC TTGCTGGGTG AGTGCCCCGA CGCTGTTCGC GCCGAGATAG TGGTCGGTGG CGAGCGCCTC TCGGCGGCGT TGATGGAGCA GTTGATGTTG GCGGCGGGCG TGTCGGCCAA TCAGCTAGTG CCACAGCAGC TGTTTGTGGC CCACGGGCCG GCGCTCGAAT CGGTTGTCGA TATCGCTGCC AGTAAGCAGC GTTTTGCCGA GCTTTCTCTC GATGCCCATC AGGTGTGGGT GATGCCCGGC TTTACCGCCG GCGATAAGGA TGGTCGTGTG GTCACCCTGG GCCGTAACGG CTCAGACTAT TCGGCGGCCG TGCTGTCGGC CTGTATCGAT GCCAGTTGCT GCGAGATCTG GACAGATGTT GATGGCGTCT ATAACACTGA CCCACGTGTC GTCGCCGATG CTAAGCTTCT GACTCAGCTC AGTTATCAAG AGGCGATGGA GCTGTCTTAT TTCGGCGCCA AGGTGCTACA TCCAAAGACA ATCGCCCCAA TCGCTCAGTA CCATATCCCT TGCTATATAC GTAACAGCTT CAACCCTCAG GCGCCCGGCA CCTTAGTATC GAATCAGGTG GACGAGACAG GTCTGAACGT TAAGGCTATC TCTAATCTCG ACGAGCAGAC CATGTTTGAT ATCGCCGGTC CCGGCATGAA GGGCATGGTT GGCATGGCGA GTCGTACCTT GGGCGCCATC TCCCGCTCTG GGGTATCAGT CTCTCTCATC ACTCAAAGCT CTTCGGAATA CAGCATCAGC TTCTGCGTGG CGACCCAAGA TGCAGAGCGG GTGCGCGTGG CGCTGGAACA GGAGTTTGAG CTGGAGCTTA AGAGCGAGAT CCTCGAGCAG ATCGCCATGC GCCACAATCT GGCCATCGTC TCGCTGATCG GTGACGGCAT GCGCACTCAC AAGGGAGTTG CCGGTAAATT CTTCCAGGCC TTGGCCCAGG CGAATGTCAA CATAGTGGCC ATCGCCCAGG GCTCCTCAGA GCGCTCCATC TCGGCGGTTA TTGAGCTGCG TAAGACCAAG CATGCTATCG CCGCCTGCCA TCAGAGTTTA TTCGATGTGC AGCACTATCT GGATGTATTC CTGGTGGGCT GCGGCAACGT GGGGGCCGGC CTGCTCGAGC AGATCAAGCA GCAGACAGAG ATGTTGAAGG CTCAGCACAT TACGGTGCGC GTCTGCGGCG TGGCCAACTC TCGCCACATG CTGCTCGATG CCAAGGGGAT AGATCTCAAC CATTGGCAGG GACTGCTTGC CGACAGCCAG CAGGCCTGCG ACCTGGACAA GATGCTCGCC TGGGCCAAAG ATCAGCAGCT ACTTAACCCT GTGCTGGTGG ATTGTACCTC TAACGAAGCC GTGTCGGATC AATATGTTGC GGTAATGAAT GCCGGCCTGC ATGTGGTTAC TCCTAACAAG AAGGCCAACA CCCGCGACTA TGACTATTAC CGCGCCCTGA GACAGACAGC TTTGCATCAG CGTCGCCAGT TCCTCTACGA GACCACGGTT GGCGCCGGCC TGCCGGTTAT CGATAACCTG AAGAAGCTGT TGTTCGCCGG TGATAAGCTG CAGAAATTCA ACGGCATCCT CTCGGGTTCA CTCTCCTACA TCTTCGGCAT GCTCGATGAG GGGATGAGTC TGTCTGAGGC GACAGGTATC GCCCGTGAGA AATGCTTTAC CGAGCCCGAC CCAAGAGACG ACCTGAGCGG CATGGACGTG GCCCGAAAGG TGCTGATCCT TGCCCGCGAA GTCGGCATGC AGATAGAGCT GAGCGATATC CAGGTGGAGT CTGTGTTGCC GAGTCATTTT GACGCCTCCG GCGATGTCGA GACCTTTATG GCGAACCTGA GCGCACTTGA TGGCGAACTT GCCGAGCGCG TAAATAGCGC CAAGGCGGCG GGTAAGGTGC TGCGTTATGT GGGACAGATA GACGAAGAGG GCTGCCGGGT GAAGATCGCC GAGGTGGACG CCAAGGATCC CCTCTACAGC GTTAAGGGCG GTGAGAATGC GTTGGCCTTC TATAGCCGTT ACTATCAGCC GATCCCATTT GTGCTGCGCG GCTATGGCGC GGGCACAGAG GTGACGGCGG CGGGTGTGTT TGCCGACCTG CTGAGAACCC TTAACTGGAC ACGGGAGATG GGCGTATGA
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Protein sequence | MKVMKFGGTS LANWQRFNSA AQIVLASAAE QPTAVVLSAP ATVTNGLLEM VDLAVAGDDF FPVLSQVHEV FKTLYGQAAS EVLSGEQSDS LEAVLAAQLK HWQDKLQGVV LLGECPDAVR AEIVVGGERL SAALMEQLML AAGVSANQLV PQQLFVAHGP ALESVVDIAA SKQRFAELSL DAHQVWVMPG FTAGDKDGRV VTLGRNGSDY SAAVLSACID ASCCEIWTDV DGVYNTDPRV VADAKLLTQL SYQEAMELSY FGAKVLHPKT IAPIAQYHIP CYIRNSFNPQ APGTLVSNQV DETGLNVKAI SNLDEQTMFD IAGPGMKGMV GMASRTLGAI SRSGVSVSLI TQSSSEYSIS FCVATQDAER VRVALEQEFE LELKSEILEQ IAMRHNLAIV SLIGDGMRTH KGVAGKFFQA LAQANVNIVA IAQGSSERSI SAVIELRKTK HAIAACHQSL FDVQHYLDVF LVGCGNVGAG LLEQIKQQTE MLKAQHITVR VCGVANSRHM LLDAKGIDLN HWQGLLADSQ QACDLDKMLA WAKDQQLLNP VLVDCTSNEA VSDQYVAVMN AGLHVVTPNK KANTRDYDYY RALRQTALHQ RRQFLYETTV GAGLPVIDNL KKLLFAGDKL QKFNGILSGS LSYIFGMLDE GMSLSEATGI AREKCFTEPD PRDDLSGMDV ARKVLILARE VGMQIELSDI QVESVLPSHF DASGDVETFM ANLSALDGEL AERVNSAKAA GKVLRYVGQI DEEGCRVKIA EVDAKDPLYS VKGGENALAF YSRYYQPIPF VLRGYGAGTE VTAAGVFADL LRTLNWTREM GV
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