| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1078 |
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| Symbol | |
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| ID | 4921043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1240366 |
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| End bp | 1240980 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162611 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001093208 |
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| Protein GI | 127512011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000031845 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.904135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAATCA CCCAACACAA AGCTGTTAGC ATCCATTACC GCTTAACGAA CCAGCAAGGC
GAGTTGATCG AGAGTTCATT TGAAGGTGAG CCAATGCTAT ACCTTCACGG TGCAGAAAAC
ATGATCCCAG GCCTTGAGCA GGCGCTCGAA GGCAAAAGTG TTGGCGACAA GCTCGACGTT
ACCGTAGAAG CCGAACAGGC TTACGGTCCT TACCACGATG GTTTACGCCA AGATGTCCCA
TTAGCAGCCT TCGGCGATAT CGAAGATATC GTGCCTGGCA TGCGTTTTAT CGCCGAAACA
GAGATGGGCC AACGTCCGGT ACAAGTGACT GAAGTGAAAG ACGATGTGGT CGTGGTTGAC
GGTAACCACC CACTCGCGGG TCAAACCCTT AACTTCAGCG TTGAAGTACT GTCAGTACGC
GACGCTAGCG CCGAAGAGAT CGCCCATGGC CATATCCATG CGGCCGGCGG CTGTGGTAGC
CACGAGCATA GCCATGAGGG TGGTTGCTGT GGCGGCGAAG GTCATGGTCA CCATGGCGGT
TGCTGTAGCG AAGATCCTGA GAAGCCAGCC AAAGAAGGTT GTGACGGCAA CGGCGGTTGC
GGCTGCCAGC ACTAA
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| Protein sequence | MIITQHKAVS IHYRLTNQQG ELIESSFEGE PMLYLHGAEN MIPGLEQALE GKSVGDKLDV
TVEAEQAYGP YHDGLRQDVP LAAFGDIEDI VPGMRFIAET EMGQRPVQVT EVKDDVVVVD
GNHPLAGQTL NFSVEVLSVR DASAEEIAHG HIHAAGGCGS HEHSHEGGCC GGEGHGHHGG
CCSEDPEKPA KEGCDGNGGC GCQH
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