| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1073 |
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| Symbol | |
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| ID | 4923402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1237259 |
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| End bp | 1237633 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640162606 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001093203 |
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| Protein GI | 127512006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.127949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAAGA TTACAAGTAA AGATTTCGAA GTCACCACTC CTATCCGTGA ACGTATCGAG
AGCCGTTTAG AAAAACTAAG TAGACACGAT GTACAGCTCA TAAATCCACA TGTAATCATA
GGTCAAGAGA AGCAAGGGTT TAAGATAGAA GCTTCAGTCG GTATACCAAG CAACACCTTA
TTTGCTCAGG CGAAAGACAA AGATCTCTAT GCAGCAATCA ATGCAATGGG TCAAAAATTG
GAGAAACAGC TCAATCGCCT CAGCCACAAA CCGGAAGGAG CTCGCTACAC AGCTCCAGCG
ACAAGCCCAA CGCCAGAAAG CGCCGAATTA GACGACGAGT ATGACGAGAC AATAGATAAG
GAATACGCGG CGTAA
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| Protein sequence | MIKITSKDFE VTTPIRERIE SRLEKLSRHD VQLINPHVII GQEKQGFKIE ASVGIPSNTL
FAQAKDKDLY AAINAMGQKL EKQLNRLSHK PEGARYTAPA TSPTPESAEL DDEYDETIDK
EYAA
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