| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1066 |
|---|
| Symbol | rplS |
|---|
| ID | 4923679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1227279 |
|---|
| End bp | 1227629 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640162599 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_001093196 |
|---|
| Protein GI | 127511999 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000285851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACA TCATTAAAAT GCTCAACGAT GAGCAAATGA AGCAAGACGT ACCAGAATTT
GGTGCAGGTG ACACAGTAGT TGTAAAAGTA CGTGTTGTTG AAGGCGGTAA AGAGCGTCTA
CAGGCGTTCG AAGGCGTTGT TATCGCTAAG CGTAACCGTG GTCTGCACTC TGCATTCACT
GTACGTAAGA TCTCTAATGG CGAAGGTGTT GAGCGTGCGT TCCAAACTCA CAGCCCGCTC
ATCTCTAGCA TCGAAGTTAA GCGTCGCGGC CGTGTTCGTC GTGCTAAGCT TTACTACCTA
CGTGAGCGTT CAGGTAAGTC TGCACGTATC CGCGAGAAGC TTGCTAAGTA A
|
|---|
| Protein sequence | MNNIIKMLND EQMKQDVPEF GAGDTVVVKV RVVEGGKERL QAFEGVVIAK RNRGLHSAFT
VRKISNGEGV ERAFQTHSPL ISSIEVKRRG RVRRAKLYYL RERSGKSARI REKLAK
|
|---|
| |