| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1056 |
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| Symbol | |
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| ID | 4921108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1218707 |
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| End bp | 1219402 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162589 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001093186 |
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| Protein GI | 127511989 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGG GATATGTACT GCACACCCGT CCCTATCGGG AGTCGAGCGT GCTGGTTAAT
CTGTTGGTCG ACGGCCTAGG CAGGGTCGAT GCCGTCGCGC GCCTGGGCAG TGGCAAGACC
TCGATAAAGA GCATACTGCA ACCCTTTCAG CCCTTGCTGT TTCAGCTGTC GGGACGAAGC
AGTCTCAAGA GCCTGTATCA GGTAGAGGCC GCCAGCCCGG CTGTGCCCCT GAGCGGCAAT
GACAGTTTCG CCGGCTTCTA TCTCAACGAG TTGTTGGTGC GCTGCTTGTC GGTAGAGCAT
GGCGCCGAGC AGTTCTTCTT TACCTATCAT AAGACACTGA TGGCCATGGC CGCCGCCTTT
AGCGAGGCGC AGCTCAGACA GTTTGAGCTT TCGCTGCTCA AGGAGCTTGG GGTGATGCCC
TCGCTCAATC TGGATATCGA AGGCAGCCCT ATCGAGACCG ACTTCTACTA CCGCCTGTTA
TCTGAAGAGG GCTTTAGCAC TGCTCTCGGC CCCAAGCCCA ACCATTTTAG TGGCGAGATG
CTGCGCGCCC TGGAGGAAGA CAGGCTGACA GAGGCCGATT TTAAACAGGC AAAACTGCTG
ATGAGGCAGT TACTGTCGCC GCTGCTGGGC GACAAGCCGC TTAAGTCGCG GGCGCTGTTT
TTAAAGGGCA ACAGGCCATC GAGTTACAGC AAGTAG
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| Protein sequence | MHRGYVLHTR PYRESSVLVN LLVDGLGRVD AVARLGSGKT SIKSILQPFQ PLLFQLSGRS
SLKSLYQVEA ASPAVPLSGN DSFAGFYLNE LLVRCLSVEH GAEQFFFTYH KTLMAMAAAF
SEAQLRQFEL SLLKELGVMP SLNLDIEGSP IETDFYYRLL SEEGFSTALG PKPNHFSGEM
LRALEEDRLT EADFKQAKLL MRQLLSPLLG DKPLKSRALF LKGNRPSSYS K
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