| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1051 |
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| Symbol | |
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| ID | 4920948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1213486 |
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| End bp | 1213962 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162584 |
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| Product | positive regulator of sigma E, RseC/MucC |
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| Protein accession | YP_001093181 |
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| Protein GI | 127511984 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000179706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAG AAACCGCCAC AGTGATCAGG TGCCCGGGCG ATGGCTGGGT CACGGTCGAA
GTGAAAGTTA AAAATGCCTG TAATCATTGC GACAATAATG ACACCTGCGG CACCTCTGCC
GTGTCTAAGG CGTTCTCGCC CAAGGTGCAG CGCTTCTCGC TGCCTAGCGA CACCCAGTAT
GAACCCGGTG AGCTGTTAAA ACTTGGTCTG CCCGAGAGCG TGATCTTAAA GGCGGCCGCC
ATCGTCTATC TTATGCCGCT GGCTGGCTTG TTTATTGGTG CCACATTAGG GCATTTCCTC
GCTGGCCTGG CAGAACTCGT GAGCAGCGAT CTGCTGACTA TCGCCCTTGG TCTGAGCGGC
GCGGCAAGTG CCTGGTGGCT GGGTCGGCGC TGGGCAAAAA CGCTGGAGAT CAACAGTCAG
CCGGTGATCC TCTCTCGCCT TGGTCGGGCC ATAGACGGTA TTTCCCCAGC CAACTAG
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| Protein sequence | MMEETATVIR CPGDGWVTVE VKVKNACNHC DNNDTCGTSA VSKAFSPKVQ RFSLPSDTQY
EPGELLKLGL PESVILKAAA IVYLMPLAGL FIGATLGHFL AGLAELVSSD LLTIALGLSG
AASAWWLGRR WAKTLEINSQ PVILSRLGRA IDGISPAN
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