| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1047 |
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| Symbol | |
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| ID | 4921428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1209447 |
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| End bp | 1211060 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162580 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_001093177 |
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| Protein GI | 127511980 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.328832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG TAGTTGAACA TCAATCTGAC GTTTTGGTTA TCGGCAGCGG AGCTGCTGGT
CTGACTTTAG CGCTACATCT GGCTGAAAAA TCAAACGTTA TCTTACTCTC CAAAGGCCCA
CTCAGCGAAG GCTCAACCTA CTACGCCCAG GGCGGTATCG CGTCAGTGTT CGATGAAGAG
GATACCATCG AATCTCACGT CACCGATACC TTGATCGCCG GGGCCGGGTT ATGCGATGAA
GAAGTTGTGA CCTTTACCGC CGAAAACGCC AAGAGCGCCA TGGAGTGGTT GATTCACTGC
GGCGTCGCCT TCGATAAAGA AGAAACCGCC GACGGCGACG AGAGCAAGGC GCCCTATCAT
CTGACCCGCG AAGGTGGCCA TAGCCACAGA CGCATCCTGC ACGCGGCCGA TGCTACGGGT
AAAGAGGTGC AGGTGACGCT ACAGGAGCGT GCCCTGAGTC ACCCCAATAT CAAGGTACTT
GAGCGCTACA ACGCCATCGA CCTTATCACC ACACGTAAGC TCAAGCGCCC GGGCAACCGT
GTGCTTGGCG CCTATGTGTG GAACCGTAAC GAAGAGCATG TGGAAACCGT TAAGGCTCGC
TTCGTCGCAC TGGCAACGGG CGGTAGTTCT AAGGTGTACC AATATACCTC GAACCCAGAT
ATCGCCTCGG GCGATGGCAT CGCCATGGCC TGGCGCTCGG GCTGCCGGGT GGCCAACATG
GAGTTCAACC AGTTCCACCC CACCTGTCTC TACCACGCCG ATGCCCGCAA CTTTTTGTTG
ACCGAGGCCC TACGCGGTGA AGGCGCCTAT CTTAAGCGTC CCGATGGCAG CCGCTTCATG
CCAGACTTCG ACGAGCGCGG CGAACTCGCG CCCCGCGATA TCGTGGCCCG CGCCATCGAC
TATGAGATGA AACGCTTAGG TGTCGACTGT GTCTACCTGG ATATCAGCCA CAAGCCGGCC
GACTTTGTCA TCAAGCATTT CCCGACTATC TATAGACGCT GTCTGGAACT GGGAATAGAT
ATCACCAAAG ATGCTATCCC TGTGGTACCC GCAGCCCACT ATACCTGCGG CGGCGTAATG
ACAGACCTGC ATGGTCAGAC AGATCTCAAT GGGCTCTACG CCATCGGCGA AGTGGCCTAT
ACCGGCCTGC ACGGCGCCAA CCGTCTGGCC AGCAATTCGT TGCTTGAGTG TCTAGTGTTT
GCCCGCGCGG CGGCCGAGGA TATCGAGAGC CAGCTGGCCA AGATCCCTAT GCCGGGTACC
CTGCCCGCCT GGGATGAGAG TAAGGTGTCG AACTCAGATG AAGAGGTAGT GATCGCTCAC
AACTGGCACG AGCTACGTCT GTTCATGTGG GACTATGTGG GGATTGTGCG TTCAGACAAG
CGCCTCGAGC GCGCCCTGCG CCGCTGCGCC ATGCTGCAGC AGGAGATCCA GGAGTACTAC
AGCAACTTCC GCGTGAGTAA CAACTTACTG GAGCTGCGTA ACCTGGTCCA GGTCGCTGAG
CTGATCATCC GCTGCGCCAT GGAGCGTAAG GAAAGCCGCG GTCTACATTA CAATATCGAC
CATCCCAACA AGAGCAATAA CCCGCTGCCA ACCATATTGC ATCCAGAGCA ATAG
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| Protein sequence | MKQVVEHQSD VLVIGSGAAG LTLALHLAEK SNVILLSKGP LSEGSTYYAQ GGIASVFDEE
DTIESHVTDT LIAGAGLCDE EVVTFTAENA KSAMEWLIHC GVAFDKEETA DGDESKAPYH
LTREGGHSHR RILHAADATG KEVQVTLQER ALSHPNIKVL ERYNAIDLIT TRKLKRPGNR
VLGAYVWNRN EEHVETVKAR FVALATGGSS KVYQYTSNPD IASGDGIAMA WRSGCRVANM
EFNQFHPTCL YHADARNFLL TEALRGEGAY LKRPDGSRFM PDFDERGELA PRDIVARAID
YEMKRLGVDC VYLDISHKPA DFVIKHFPTI YRRCLELGID ITKDAIPVVP AAHYTCGGVM
TDLHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAAAEDIES QLAKIPMPGT
LPAWDESKVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCA MLQQEIQEYY
SNFRVSNNLL ELRNLVQVAE LIIRCAMERK ESRGLHYNID HPNKSNNPLP TILHPEQ
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