| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1037 |
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| Symbol | |
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| ID | 4920592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1199866 |
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| End bp | 1200537 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162570 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_001093167 |
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| Protein GI | 127511970 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3066] DNA mismatch repair protein |
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| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000023466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGTA AAATTCTTCC CCCCGAATCC CTCGACGAGC TGATGCAGCG TGCCCAGGAG
ATGGCCGGAC TCACACTGGG CCAGCTGGCC GAGCTTCACC ATGTCGCCGT GCCGAGCAAC
CTGAAACGGG ACAAAGGCTG GATAGGCCAG CTTATCGAGC TCGAACTGGG GGCCACCGCC
GGCTCTAAGC CGGAGCAGGA CTTTCTCCAC CTCGGCGTCG AGCTCAAAAC CATTCCTGTG
GATGAATCGG GTAAGCCGCT AGAGACCACC TATGTCACTG TCGCGCCGCT GATGAATATC
AATGGCCTCA GATGGCAGGA GAGTCTGGTA TATCATAAGT TACAGCGGGT GCTGTGGATC
CCGGTGGAGG GCATTCGCCA CAAGCCGATT GGTGAGCGGC GCATCGGCAG TCCGATCCTC
TGGACCCCGA GCGAAGAAGA GATGGCGCAG ATACGTCAGG ACTGGGAAGA GATCATGGAG
CTTATCGCCC TAGGCAAGGT CGAGCAGATC ACCGCCCGTC ACGGCGAGGT GCTGCAGCTC
AGGCCCAAAG GCGCCAACAG CCGCGCACTG ACCCAGAGCA TAGCGCAAGA TGGTCAGGTT
AAACTCACCA ACCCGCGGGG CTTCTATCTT AAAATCCCCT TCACTCAGCA GATCTTGAGC
CGCTATTTCT AG
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| Protein sequence | MKSKILPPES LDELMQRAQE MAGLTLGQLA ELHHVAVPSN LKRDKGWIGQ LIELELGATA
GSKPEQDFLH LGVELKTIPV DESGKPLETT YVTVAPLMNI NGLRWQESLV YHKLQRVLWI
PVEGIRHKPI GERRIGSPIL WTPSEEEMAQ IRQDWEEIME LIALGKVEQI TARHGEVLQL
RPKGANSRAL TQSIAQDGQV KLTNPRGFYL KIPFTQQILS RYF
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