| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1036 |
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| Symbol | |
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| ID | 4920605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1198447 |
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| End bp | 1199466 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162569 |
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| Product | putative adenylate/guanylate cyclase |
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| Protein accession | YP_001093166 |
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| Protein GI | 127511969 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000150987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCT TTGTGTTTTT CCGCTATGCG CAAACACCAG AGCTGCCCCA ATGGGCGGTA
GGCACAGCCG ATCTCGCGAC CCTGGCGATC TATATGGGGA TCATCTTTGG TAGTCTGCAC
TGGATGTCGA ACCTGATCGC CGACTTTAGC GCCATCAATC GCCTGCCCTA TCTGTTTTCG
GTGATCTTCA AGGGACTCTT CCTCTTGCTT GGGGCGACCA CCCTCGCCTA CATGACCCAG
TTCCTCAACA TGTGGGCCAT TGAGAACCAT ATGTCGACCC TCAGGCAGAT GTTGACCGCT
CATATTCTCT ACAGCCCCTC GTTCCAGGCC CTGATCATCT ACCTAGTAGT GGTGCGTGTC
GGCCTGGCCT TCATCGAGCA GATGGCGCTT TTGGTCGGCC CACGTATTCT GTTTAATATC
GGCCTGGGTA AATACCACAG GCCAAGGTAT GAACAGCGTC TGTTTCTCTA TCTGGACATG
GTTGCCTCGA CCACCCACGC GGAATCTCTG GGTGACTATC GCTTCAGTCG CCTGATCCAG
GACTGCTTTA GCCTATTATC GGACACCGTG GTCAACAACG ACGCCGAGAT CTATCGCTAC
ATGGGCGATG CCGTGCTGAT CCACTGGCCG CTGGAAAACG GCATCATAGA AGATCGCAGC
TTCAATATTT ATTATGAGTT CAGCCAGCAA CTTAACTGGC AGCGCAAGTA CTTCGAAGAG
CAGTATGGTT TTGTGCCTAA GTTTAAGGCG GCGGCCCACT GTGGTCAGGT GGTGGCGGCT
GTGGTTGGGG TGCAGAAGCA GGAGATCAGC TTCTTCAGCG ACGTGCTCAA TACCCTGGCG
AGACTTCAAG ATCAGTGTAA CCCACTGGGG CAGCGGATGC TTATCTCAGG CTCACTGCAG
TCGCTTATCG ACACTGGTGA CAGTCACTAC GACTTTACCA ACCTTGGTCC AATCAAACTC
AAGGGGAAAC AACACTCTAT CGAGGTGTAT GGAGTTTCCC CCAAGGGTAG CAACAGTTAG
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| Protein sequence | MAAFVFFRYA QTPELPQWAV GTADLATLAI YMGIIFGSLH WMSNLIADFS AINRLPYLFS
VIFKGLFLLL GATTLAYMTQ FLNMWAIENH MSTLRQMLTA HILYSPSFQA LIIYLVVVRV
GLAFIEQMAL LVGPRILFNI GLGKYHRPRY EQRLFLYLDM VASTTHAESL GDYRFSRLIQ
DCFSLLSDTV VNNDAEIYRY MGDAVLIHWP LENGIIEDRS FNIYYEFSQQ LNWQRKYFEE
QYGFVPKFKA AAHCGQVVAA VVGVQKQEIS FFSDVLNTLA RLQDQCNPLG QRMLISGSLQ
SLIDTGDSHY DFTNLGPIKL KGKQHSIEVY GVSPKGSNS
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