| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1032 |
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| Symbol | gltB |
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| ID | 4920695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1190911 |
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| End bp | 1195359 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162565 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_001093162 |
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| Protein GI | 127511965 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.843249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGT ATCACCCCAG TTTTGAACGA GATAACTGTG GTTTTGGCTT AATCGCCCAG
ATGGATGGCG AAGCCAGCCA TAGAATTGTA CGTACAGCCA TTCATGGCCT GGATCGCATG
AAACACCGTG GTGGTATTGC CGCCGACGGT CGTACCGGCG ATGGTTGTGG CCTACTTATG
CAACTCCCCA TTAAATTCTT CGAAGCCGTG GCCAGCGAGA ACGACTGGCA CCTGAGCCGT
AAGTTTGCCG TGGGCATGCT GTTCCTAAGC CAAGATGAGG AAAAGGCCAA CTACACCAAA
CGCACCCTGG AACGTGAGCT GGAGAAAGAA ACACTGAGTG TGGCCGGTTG GCGTGAAGTC
CCGGTCAACC CTGAGGTATT AGGCCCCATA GGCCAGGCCA GCCAGCCCAA GATCTGGCAG
GTGCTGATCA ACTCACCCAT AGGTTGGCGT GAGAAAGATC TCGAGCGTCG CCTCTATATG
GCCCGTCGCC GTCTCGAGCA GCAGATAACT GACTGCGAAG ACTTCTATGT TGCCAGCCTC
TCTGGCCAGG TGATCGTCTA CAAGGGGCTG ATGATGCCCG CCGATCTGCC GGCCTTCTAT
CCGGATCTGG CCGACATACG TCTGCAAAGC GCCATCTGTC TGTTCCACCA GCGCTTCTCA
ACCAATACCT CGCCCAAGTG GCCGCTGGCA CAGCCGTTTC GCTATCTTGC CCACAACGGC
GAGATCAACA CCATAACCGG TAACCGTCAG TGGGCCCGCG CCCGCGCCTA CAAGTTTAAT
GCCCCACTGC TGCCGGATCT GCAGCAGGCA GCGCCCTTCG TCAACGAGAG CGGCTCAGAC
TCCTCCTCAT TAGATAACAT GCTGGAGATG CTACTCGCCG GCGGCATGGA CCTCTACCGT
GCCATGCGCC TGCTTATTCC GCCCGCGTGG CAGAGTAACC CAGAGATGGA CGATGAGCTG
AAAGCCTTCT ACGACTTCAA CTCCATGCAT ATGGAGCCCT GGGACGGTCC GGCAGGCATA
GTCATGACCA ACGGCCGCCA TGTGGCCTGT GCGGTAGACC GTAACGGCCT GCGCCCATCA
CGCTATGTGA TCACCAAAGA TCGTATCCTG ACCCTGGCCT CCGAGATCGG CATCTGGGAC
TATGCCCCGG ACGAGGTGGT CGAGAAGGGC CGTGTCGGCC CGGGTGAGCT GTTGGTGCTC
GACACCCTCA ACGGTCAACT CTACTCTTCG TTTGAGATCG ATAACGACCT TAAGCGTCGC
CACCCCTACA AGGAGTGGAT GGCCAAGAAC AGTCAGACCC TGATACCCGC CGAGCAGATG
CCGAGCGAAG CCCAGGGCGT ATGTGAGTTC TCCGCCGATA CCCTGCTGCA ATACCAGAAG
CAGTTCGGCT ACTCCCGCGA GGAGCTTGAG CAAGTGATCT GGGTACTGGC CGAGAAAGGC
GAAGAAGCCA CCGGCTCCAT GGGCGACGAT ACCCCTATGG CCGTGCTGTC GAAGAAGTCC
CGTACCCTGT ACGACTACTT CCGCCAAAAA TTCGCCCAGG TGACCAACCC GCCAATCGAT
CCGCTGCGTG AAAAGCATGT GATGTCCCTG GCCACCTGTG TCGGCCGTGA GCAGAACCTG
TTTAACGAGA CCACTGGCCA CGCCTACCGC GTAATGTTCA GCTCGCCTAT CTTGCTCTAC
AGCGACTTCA ACCAGCTGCT GGCGCTGGAT TCGACCTATT ACCGCGCCAA CACTGTCGAT
CTAAACTATG ACCTTAGCGA AGGCTTAGAG GCAGCCATTC GCCGCGTCTG TGACGAGGCC
GAGCGCCTGG CACGTACCGG CACCACCTTG CTGATCCTCT CCGACAGGGC CACCGACAAG
AGTAAGCAGG TGATCCCCGC CGCCATGGCC GTGGGCGCCG TGCAGCGCGT GCTGGTCGAC
AAGAGTCTGA GATGTGACAC CAACATCATA GTCGAGACCG CCTCGGCCAG AGATCCGCAC
CACTTCGCCG TACTGCTGGG CTTTGGCGCC ACCGCCATCT ACCCTTACCT GGCCTACGAG
AGCATCTCGG CGCTGGCCAG CCGTCATGGC GTGCGCGAGA CCCAACAGCT GATGCTCAAC
TTCCGTCAGG GCATCGACAA GGGGCTGCGT AAGATCATGT CCAAGATGGG GATCAGTACC
GTGGCCTCCT ACCGCTGTAG CCAGCAGTTC GAAGCTATCG GCCTGTCATC TGAGGTGGTT
GAGCTATGCT TCAAGGGTGT GGTCAGCCGC ATCGAAGGCG CGAGCTTCGC CCTGCTGGAG
AAAGATCAAC AGACGCTGCA GAAGCTTGCC TTCCAGGCCC ATCAGCCCCT GCCTCAGGGC
GGTCTGCTGA AATATGTTGA AGGCGGTGAG TACCACTGCT TCAACCCAGA TGTGGTCAAC
ACGCTGCAGC AGAGCCTGCG CGATCAGGAC TATGGCGTCT ACAAGCGCTT CACCGAGTTG
GTGGACGACA GACCCGTGGC GACATTGAGG GATCTCTTCA CCGTCAAGGG TGACAAACAG
GCTATCGAAC TCGACAAGGT CGAGGGCGCA TCCACTCTCT ATCCAAGATT CGACAGCGCC
GCCATGAGTA TCGGCGCCCT CAGCCCAGAG GCCCACGAGG CACTGGCCGT GGCCATGAAC
CGCCTCGGCG GTCGCTCTAA CTCGGGCGAA GGCGGGGAAG ATCCGCGCCG CTTCAACTCG
GAGCGTAACT CGGCCATCAA GCAGATCGCC TCGGGCCGCT TCGGCGTCAC GGCGCACTAT
CTGGTGAACG CCGAGGTGCT GCAGATCAAG GTCGCCCAGG GCGCCAAGCC AGGCGAAGGC
GGTCAACTGC CAGGCGACAA GGTGAGCGTA GAGATCGCCG CGCTGCGTAA CGCACGCCCA
GGCGTCACCC TGATCTCGCC GCCGCCGCAC CATGATATCT ACTCCATCGA AGACTTGGCT
CAGCTGATCT TCGACCTCAA GCAGATAAAC CCCAAGGCGA TGATCTCGGT CAAGCTGGTA
TCCGAGCCAG GCGTAGGCAC CATTGCCACA GGCGTGGCCA AGGCCTATGC CGACATGATC
ACCATCTCTG GCTACGACGG CGGCACGGGC GCCAGCCCTA TCACCTCGGT GAAATATGCC
GGTAGCCCCT GGGAGCTGGG TCTGGCCGAG GTGCATCAGT CGCTGGTCGC CAATGGCCTG
CGCCACAAGA TCCGCCTGCA GGTGGACGGT GGCCTCAAGA CGGGTACAGA CGTGATCAAG
GCGGCCCTGC TGGGCGCCGA GAGCTTCGGC TTCGGCACCG TGCCTATGAT CGCCCTGGGT
TGTAAGTACC TGCGTATCTG CCATCTGAAC AACTGCGCCA CCGGCGTGGC GACCCAGAAC
AAGCAACTCA GGGACAATCA CTACCACGGC CTGCCCGAGC GCGTGATGAC CTACTTCGAG
TTTATGGCCC GCGAGATCCG CGAGTGGATG GCCGCCCTCG GCGTCACAGA GTTCGAACAG
CTAGTGGGTC GCAGCGACTG GCTCGCGGCG CTGGAAGGCG CCACAGACAA GCAGCAACAA
CTGGATCTGT CCGCCATTCT CTACAAGCCA GAGGTGCCAG AGGGCTGCGC GCTGACCTGG
CGTGAAACCA ACCCGACCGA CGACAAGGGC GAGCTTAACC AGAAAATTTT GAGCCACTGC
CAAGCAGCCG TCGATCAGGG CGAGCCACTG ACCGCACGTT TCGAGATCAA CAACACCGAC
CGTTCGGTAG GCGCGGCGCT GTCTGGCTAC ATTGCCACCA AAGTCGGCCG TCAGGGTGCC
AAGGCGCCGA TACAGCTTAA CTTCAGCGGC AGCGCGGGTC AGAGCTTCGG CGTTTGGAAC
GCCCCGGGCC TGTCACTGGA TCTGTGCGGC GATGCCAACG ACTATGTGGG CAAAGGCATG
TCGGGCGGCA AGATCACCCT CTATCCGCCT GTGGGCAGCA TGTTCCAGAG CGAGAAGAGC
GTCATCCTGG GCAACACCTG TCTCTACGGC GCCAGCGGCG GTAAGCTGTT TGCGGCCGGT
CAGGCGGGCG AACGTTTCGC CGTGCGTAAC TCGGGCGCCA TCGCCGTGGT CGAAGGCCTG
GGCGATAACG GCTGCGAATA CATGACAGGC GGTATCGTGG TAGTGCTGGG TAAGACGGGC
GTTAACTTCG GCGCCGGTAT GACGGGCGGC TTCGCCTATG TGTTCGACCG CTTCGGCCAC
TTTAACCGCC GTCTCAATAC CGAGATGGTG GATATGCAGA AGGTGACGGC GCCGATACAG
CAACAGCACC TCAAGGGGCT GATCGAAGAG CACGTGGCCG AGACCGGCAG CGAGCACGCC
AAGATGTTGT TAAACGATTT TGAAAACTGG ATCGATTGTT TCGTCCTGGT CAAGCCTAAG
AATGTGGCGC TCGATGATCT CCTGCGTCTG GAACAAACTG AACCTGCATT AGCAGTGGTA
GCGGGGTAA
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| Protein sequence | MSLYHPSFER DNCGFGLIAQ MDGEASHRIV RTAIHGLDRM KHRGGIAADG RTGDGCGLLM
QLPIKFFEAV ASENDWHLSR KFAVGMLFLS QDEEKANYTK RTLERELEKE TLSVAGWREV
PVNPEVLGPI GQASQPKIWQ VLINSPIGWR EKDLERRLYM ARRRLEQQIT DCEDFYVASL
SGQVIVYKGL MMPADLPAFY PDLADIRLQS AICLFHQRFS TNTSPKWPLA QPFRYLAHNG
EINTITGNRQ WARARAYKFN APLLPDLQQA APFVNESGSD SSSLDNMLEM LLAGGMDLYR
AMRLLIPPAW QSNPEMDDEL KAFYDFNSMH MEPWDGPAGI VMTNGRHVAC AVDRNGLRPS
RYVITKDRIL TLASEIGIWD YAPDEVVEKG RVGPGELLVL DTLNGQLYSS FEIDNDLKRR
HPYKEWMAKN SQTLIPAEQM PSEAQGVCEF SADTLLQYQK QFGYSREELE QVIWVLAEKG
EEATGSMGDD TPMAVLSKKS RTLYDYFRQK FAQVTNPPID PLREKHVMSL ATCVGREQNL
FNETTGHAYR VMFSSPILLY SDFNQLLALD STYYRANTVD LNYDLSEGLE AAIRRVCDEA
ERLARTGTTL LILSDRATDK SKQVIPAAMA VGAVQRVLVD KSLRCDTNII VETASARDPH
HFAVLLGFGA TAIYPYLAYE SISALASRHG VRETQQLMLN FRQGIDKGLR KIMSKMGIST
VASYRCSQQF EAIGLSSEVV ELCFKGVVSR IEGASFALLE KDQQTLQKLA FQAHQPLPQG
GLLKYVEGGE YHCFNPDVVN TLQQSLRDQD YGVYKRFTEL VDDRPVATLR DLFTVKGDKQ
AIELDKVEGA STLYPRFDSA AMSIGALSPE AHEALAVAMN RLGGRSNSGE GGEDPRRFNS
ERNSAIKQIA SGRFGVTAHY LVNAEVLQIK VAQGAKPGEG GQLPGDKVSV EIAALRNARP
GVTLISPPPH HDIYSIEDLA QLIFDLKQIN PKAMISVKLV SEPGVGTIAT GVAKAYADMI
TISGYDGGTG ASPITSVKYA GSPWELGLAE VHQSLVANGL RHKIRLQVDG GLKTGTDVIK
AALLGAESFG FGTVPMIALG CKYLRICHLN NCATGVATQN KQLRDNHYHG LPERVMTYFE
FMAREIREWM AALGVTEFEQ LVGRSDWLAA LEGATDKQQQ LDLSAILYKP EVPEGCALTW
RETNPTDDKG ELNQKILSHC QAAVDQGEPL TARFEINNTD RSVGAALSGY IATKVGRQGA
KAPIQLNFSG SAGQSFGVWN APGLSLDLCG DANDYVGKGM SGGKITLYPP VGSMFQSEKS
VILGNTCLYG ASGGKLFAAG QAGERFAVRN SGAIAVVEGL GDNGCEYMTG GIVVVLGKTG
VNFGAGMTGG FAYVFDRFGH FNRRLNTEMV DMQKVTAPIQ QQHLKGLIEE HVAETGSEHA
KMLLNDFENW IDCFVLVKPK NVALDDLLRL EQTEPALAVV AG
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