| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1027 |
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| Symbol | |
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| ID | 4923810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1185380 |
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| End bp | 1186072 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162560 |
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| Product | methylthioadenosine nucleosidase |
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| Protein accession | YP_001093157 |
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| Protein GI | 127511960 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.767246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTG GTATTATCGG CGCCATGGAG CCAGAAGTCG CTCATCTTAT CGCGTCTATG
ACAGACACTC AGACCCAGAC CATCGCCGGC ATAGAGTTTG TCGCCGGGCA GCTTGAGGGC
AAAGAGGTGA TCGTCACCCG CTCTGGCATC GGCAAGGTCA CCGCCAGTGT CGCCACCACA
TTGCTGATTG AGAAATATGC CCCGGATTAT GTGATCAACA CAGGCTCGGC AGGCGGCTTC
GTCGACAGCC TGGCCATCGG CGATATCGTT ATCTCCTCAG AGGTGCGCCA CCACGACGTG
GACGTGACCG CCTTCGGCTA CGAGATAGGT CAGATGGCTC AGCAACCGGC AGCCTTCATG
CCTGACAGAA CTCTGGTCGA GGCGGCCAAG AAGGCGGTTG CGGATCTGGG CGAGGTGAAG
GCTATCGAGG GACTTATCTG CACCGGCGAC AGCTTTATCT GCGACCCTGA GCGCACTAAG
GTGATGCTGA ATAATTTCCC GACCATGGCG GCCTGTGAGA TGGAGGGCGC TGCGATTGCC
CAGGTGTGTC ACCAGTTCAA GGTGCCTTTC GTGGTGATTC GCTCGCTGTC TGACAACGCC
AACAACGACT CGCCGGTAGA TTTTGACAGC TACCTGGTGA AGGCGGGCCA TCATTCGGCG
CTGATGGTGA TCTCGCTGCT GAAACACCTG TAA
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| Protein sequence | MKIGIIGAME PEVAHLIASM TDTQTQTIAG IEFVAGQLEG KEVIVTRSGI GKVTASVATT
LLIEKYAPDY VINTGSAGGF VDSLAIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFM
PDRTLVEAAK KAVADLGEVK AIEGLICTGD SFICDPERTK VMLNNFPTMA ACEMEGAAIA
QVCHQFKVPF VVIRSLSDNA NNDSPVDFDS YLVKAGHHSA LMVISLLKHL
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