| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1024 |
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| Symbol | |
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| ID | 4923547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1183237 |
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| End bp | 1183857 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162557 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093154 |
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| Protein GI | 127511957 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2860] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0468656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAGT GGATCTACTT TTTCGACCTC TGCGGTACCG CGGTATTTGC CCTCTCCGGC
GCCTTAGCCG CCGGGCGTCA TCGCATGGAT CCCTTTGGGG TGATAGTCCT TGCCTCGGTC
ACCGCCATTG GCGGCGGCAG CATACGTGAC GCCTTGCTGG GCACCACGCC GGTATTTTGG
ATCCGCGACC CCAACTACAT CATAGTGATC TTGGCAACCG TGCTGCTGGC CCTGCTGTTT
ATTCGCAAGC CCAAGAAGGT GCCCCAGTAC ACGCTACCGG TGGCCGATGC CTTCGGATTG
GCGCTGTTTA CCGTGATCGG GGCGGAAAAG GCACTCAATC TTGGCCTCAG CGGCATGATT
GCCGTGGTGA TGGGCTTGAT AACTGGCGTC GGAGGCGGCA TTATTCGAGA CATACTCTGT
CGCCAGATCC CCATGATATT GCGCACCGAA ATCTATGCGA CCGCCTCGAT ATTTGGCGGG
ATAAGCTATA CCTGTGCCAT CACCTGGGGC TTGGCCGATA AGGTGGCCCT GGCCATCGCC
ATGATAAGTG CGCTCGTCAT ACGCTTGGCG GCCATCAAGT GGCACCTGAG ACTACCGGCG
TTTGAATTAA AGAAAACATA A
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| Protein sequence | MKEWIYFFDL CGTAVFALSG ALAAGRHRMD PFGVIVLASV TAIGGGSIRD ALLGTTPVFW
IRDPNYIIVI LATVLLALLF IRKPKKVPQY TLPVADAFGL ALFTVIGAEK ALNLGLSGMI
AVVMGLITGV GGGIIRDILC RQIPMILRTE IYATASIFGG ISYTCAITWG LADKVALAIA
MISALVIRLA AIKWHLRLPA FELKKT
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