Gene Shew_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1016 
Symbol 
ID4923103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1176212 
End bp1177129 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content57% 
IMG OID640162549 
Producthypothetical protein 
Protein accessionYP_001093146 
Protein GI127511949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATT ATCATCGCTG GGTCGATCGC ATGCAAGTGC TCGAACGAAA AATTAGACCT 
TCGAGCGTTT ATCTGTTTTG TTTAGTGATC GTGGCCTTCT TACTCGGCGT GTTGACCTGG
GACCTCTGGT CCGCCAATCA TTCGGTGACA CCGACCCAAT CCAATGGCCG CGAGGCCGAG
CTGCGCCAGG CGCTCAAGGA GCAGGCCGAG GTGCTGGCCT CGCGTAATCT CGAGCTGTCG
CTGGAGCGCG AAGCCAACAG TAACATGCAG AAGATGTTTC TCGAGCAGCA TCAGAAACAG
AAGTCACTCG ACAGAGAGCT GGCCTTCTAC CGCAGCATCA TGGCGCCAGA GCATCAGGCC
GACGGCGTCG CCATTCACGG ACTGGAGATG ACGCCGGGCC CACTGACCCA TCAGTATCAG
ATCAAGTTAG TGCTTACTCA GCTGCAGAAG CGCAAGCAGG CGTTGAAGGG CCAGGCCAAG
CTCGTTTTTG TCGGCGTGCA GCAGGGCAAG ATAGTGACCC TGCCACTTTC ATCGCTTACC
GATGCCAAGT TTGCCTTTAG CTTCCGTTAT TTTCAGACCC TTGAGGCGCA GATCACCCTG
CCAAGCGATT TCGAGCTGTC TCGGGTCGAG ACTGAGGTCA TAGTGCCCGC CAGTCGCTGG
AGTAAGGGCG CAAAGGCGCA GCAGAGCTTC AGCGCCCAGG AACTTCTGGC CACGCCAGAG
GGCGACACTG ACGTAGGTGC CCGCTCCGGC GGCGAGCCCA ACGCGGTAGA GGAGCCCCAT
GGGGAGGAGG GCTATGCCCC CGCCGAGGAG GGCGAAGGTT CACAGATTTC AACAGAGCCA
CGACTATTAC TTGAACAAAA TAGTCAGGTA TCGGATAATT CCGCTCAGCA AACCGATGTA
AGAGGTAGTA ATGACTGA
 
Protein sequence
MPNYHRWVDR MQVLERKIRP SSVYLFCLVI VAFLLGVLTW DLWSANHSVT PTQSNGREAE 
LRQALKEQAE VLASRNLELS LEREANSNMQ KMFLEQHQKQ KSLDRELAFY RSIMAPEHQA
DGVAIHGLEM TPGPLTHQYQ IKLVLTQLQK RKQALKGQAK LVFVGVQQGK IVTLPLSSLT
DAKFAFSFRY FQTLEAQITL PSDFELSRVE TEVIVPASRW SKGAKAQQSF SAQELLATPE
GDTDVGARSG GEPNAVEEPH GEEGYAPAEE GEGSQISTEP RLLLEQNSQV SDNSAQQTDV
RGSND