| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1013 |
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| Symbol | |
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| ID | 4921834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1172369 |
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| End bp | 1173388 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162546 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_001093143 |
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| Protein GI | 127511946 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.124767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGT TTCAAGGTTC ACACATCCTC TCGGTAAACC AACTCAATCT AGATGCCGTA
CAAGAGATCT TTAGCGTCGC ATCGCGAATG ACTCCCTATG CCCTCAGACG CAAACGCACC
ACGGTACTCG ACGGCGCGAT TCTGGGTAAT CTGTTTTTCG AACCCAGCAC CCGTACCCGG
GTCAGCTTCG GCAGTGCCTT CAACCTGCTG GGCGGCAAGG TCAACGAAAC CGTCGGCATA
GGCACCTCGT CACTCTCTAA GGGTGAGTCC CTGTACGACA CCGCCCGCGT ACTTTCTAGC
TACTCGGATG TGATCGCCAT GCGTCATCCC GATGCCTATT CGGTGCGTGA GTTTGCCGAG
GGTAGCCGAG TACCAGTAAT AAACGGTGGC GACGGCCCGA ACGAGCACCC GACCCAGGCG
CTGCTGGATC TGTTCACCAT TCAGAAAGAG CTGGCCGCCG GTGGCCGCAG CATCAGCGGC
ATGCACATCG CCATGGTGGG CGATCTCAAG TTTGGCCGCA CGGTACACTC GCTGTCGCGC
CTTCTATGCA TGTACAAGGA TGTGAGCTTC ACCCTGATCT CACCAAAAGA GCTGGCAATG
CCAGACTATG TGATCGATGA CATTGAAAAT GCTGGGCATA AGATCACAAT AACAGATCAA
CTTGAAGGCA ATTTAGATCA GGCTGATATA CTCTACCTGA CGCGTATTCA AGAAGAGCGT
TTTCCTTCAC AGGAAGAGGC CAACAAGTAT CGTGGTAAGT TCCGCTTAAA CCACAATATT
TACACACAGC ATTGCAAATC GAATACAGTG ATCATGCATC CGCTGCCCCG CGATTCGAGA
GAGCAGGCCA ACGAGCTGGA CAATGACCTC AACAGTCATC CAAACTTGGC CATCTTCAGA
CAGGCAGATA ACGGATTGCT TATCCGCATG GCGCTGTTTG CGTTGACATT AGGTGTTGAT
TCACAGCTTG AACAGCACGA ATGTCCGGTA AATTGGTATT CACAAAAAGC CGATTTTTAA
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| Protein sequence | MTQFQGSHIL SVNQLNLDAV QEIFSVASRM TPYALRRKRT TVLDGAILGN LFFEPSTRTR
VSFGSAFNLL GGKVNETVGI GTSSLSKGES LYDTARVLSS YSDVIAMRHP DAYSVREFAE
GSRVPVINGG DGPNEHPTQA LLDLFTIQKE LAAGGRSISG MHIAMVGDLK FGRTVHSLSR
LLCMYKDVSF TLISPKELAM PDYVIDDIEN AGHKITITDQ LEGNLDQADI LYLTRIQEER
FPSQEEANKY RGKFRLNHNI YTQHCKSNTV IMHPLPRDSR EQANELDNDL NSHPNLAIFR
QADNGLLIRM ALFALTLGVD SQLEQHECPV NWYSQKADF
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