| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1012 |
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| Symbol | |
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| ID | 4921308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1171055 |
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| End bp | 1172341 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162545 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_001093142 |
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| Protein GI | 127511945 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000957306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTT CTGAAACCCT ATTTGAGCAG GCTAAGAAAA CTATCCCTGG TGGCGTTAAC
TCACCCGTGC GTGCCTTCAA CGGCGTGGGT GGTTCACCAC GTTTCATCGA AAAAGCCGAC
GGCGCTTACA TCTATGATGC CGACGGCAAG GCCTATATCG ACTATGTTGG CTCTTGGGGC
CCGATGATCT TGGGTCATAA TCATCCAAAG ATCCGTCAAG CCGTACTGGA CGCAGTAGAG
AATGGTCTCT CTTTCGGTGC GCCAACCGAG CTTGAAGTGC GCATGGCCGA GAAGGTGATC
GAGATGGTGC CTTCGATGGA ACAGGTTCGT ATGGTGAGCT CAGGCACAGA AGCCACCATG
AGCGCCATCC GTCTGGCACG CGGCTTTACC AATCGCGACA AGATCCTCAA GTTTGAAGGC
TGCTACCACG GCCATGCCGA CTGTCTGCTG GTAAAAGCGG GCTCTGGTGC CCTGACCCTA
GGTCAGCCAA GCTCTCCGGG TATCCCGGAA GATTTTGCTA AGCACACGCT GACCGCGGTT
TACAACGAGC TGGAATCTGT GAAGACACTG TTTGAACAGT ACCCAGAAGA GATCGCCTGT
ATCATCCTTG AGCCAGTTGC CGGCAACATG AACTGCATCC CGCCAATTCC AGGCTTCCTG
GAAGGTCTGC GCGCCCTGTG TGACCAGTAT GGCGCCCTGC TGATCATCGA CGAGGTGATG
ACAGGTTTCC GCGTCTCTAA GAGTGGTGCA CAAGGCCACT ACGGCATTAC GCCTGACCTG
ACCACACTGG GTAAGGTTAT CGGCGGCGGT ATGCCAGTGG GCGCCTTTGG TGGCCGTAAA
GAGGTGATGC AGTTCATCGC CCCTACAGGT CCTGTGTATC AGGCAGGTAC CCTGTCGGGT
AACCCTATTG CCATGTCGGC AGGTCTAGCG CAGATGGAAG AGCTTTGCGC CGAAGGCCTG
TATGAAGAGC TGGCCGCCAA GACCAAGCGT ATCGCCGAAG GCTTCAAGGC CGCAGCCAAC
AAGCATGGTA TTCCGCTGAG CATCAACTAT GTGGGCGGCA TGTTCGGTTT CTTCTTTACC
GAGCTGGAGC AGGTAACCCG CTTCGATCAG GTCACCCAGT GTGATGCAGA AGCCTTCCGC
ACCTTCTACC ACGGCATGCT GGACGAAGGC GTTTACCTGG CGCCTAGCGC TTATGAAGCT
GGCTTCCTCT CTATGGCACA TGGCGAGAAG GAACTGGAAG AAACGCTGGC CGCAGCGGAT
CGCGTCTTCG CCCGCATGGC TAAGTAA
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| Protein sequence | MTRSETLFEQ AKKTIPGGVN SPVRAFNGVG GSPRFIEKAD GAYIYDADGK AYIDYVGSWG
PMILGHNHPK IRQAVLDAVE NGLSFGAPTE LEVRMAEKVI EMVPSMEQVR MVSSGTEATM
SAIRLARGFT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAV
YNELESVKTL FEQYPEEIAC IILEPVAGNM NCIPPIPGFL EGLRALCDQY GALLIIDEVM
TGFRVSKSGA QGHYGITPDL TTLGKVIGGG MPVGAFGGRK EVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMEELCAEGL YEELAAKTKR IAEGFKAAAN KHGIPLSINY VGGMFGFFFT
ELEQVTRFDQ VTQCDAEAFR TFYHGMLDEG VYLAPSAYEA GFLSMAHGEK ELEETLAAAD
RVFARMAK
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