| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1011 |
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| Symbol | |
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| ID | 4921389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1169183 |
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| End bp | 1170430 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162544 |
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| Product | citrate transporter |
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| Protein accession | YP_001093141 |
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| Protein GI | 127511944 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000075271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA TTTTCCTGAT CACACTTGCT GTGCTAGCGC TATTAAGCAT TATTTTTGAA
GAAGTTACCC ACATTAATAA GGCTAAAACC ACCCTCTTCT TCGGCTGTGT TGCCTGGATC
ACCCTGTTTG TTGCGGCGCG AGATCCCAGC CACCAGCACC TAGTGGCAGA GGAACTGGAC
CACAACCTGT TGGAAATCGC CACCCTCTGG CTCTTCCTGA TGTCCACCAT GACCTTCGTG
GCCTATCTGA ACGCCAAGGG CATGATTCAG ATCCTGGTGC AGAAGCTGTT CCCCCAGAAG
GTCTCTGTGC GCATGCTGAT GATACAGGTG GCACTCTTCT CCCTAGTGCT GTCGGCCATC
TGTGATAACG TCACCGCGAC CCTGGTTTCC TTGGGCTTGT TGACCACCTT TCAACTCGAG
AGCCAGATGA AGCGCCGCAT GTCGGTACTC ATCATCTTCG CGGTGAACTC GGGCGGTGTG
GCGCTGATCA CCGGTGACGT GACAACCCTA ATGATCTTCC TCGGCGGCCA TGTCCATATC
TCGCAGCTGC TTATGCTATT TATCCCGGCG GCGGCCAGTG TGATGCTGCT GGCGGTGCTG
TTCTCGCTGA AGGCGGAAGG CTATGTGAGC ACCACCCCCA TCAAGCGCCA ATACAGCAAG
CTGGATGTGT TTATCGCCCT CATCTTCCTG ATCACCATCA TAATGACCAT GGTGCTCAAC
ATCTTCTTCG GTATTCCGCC TGTGCTGACC TTCCTGTCGG GTCTGTCGGT GATGTTCCTG
ATGGGCACGT TGCAGCGCAG CAACAAAGAA GAGCTACAGA TCCTCGAATA TATCCGTCAG
GTAGAGTTCG AAACCCTACT CTTCTTCCTG GGGATCTTGC TGCTCGTGGG CATGCTAAAA
GAGATTGGCA CCCTGCATCT ACTGACCGAG GTCTATGCCA AGTTTGACCC GAACATCTCT
AACTTCGTGA CGGGTATCGG CTCGGCGATT CTGGATAACG TACCGCTCAC TGCGGCGCTA
TTGAAGGCCG AACCTGTGCT TAACACCCCT GAGTGGCTGG GCCTCACCTA CTCTGTAGGC
GTGGGCGGCT CTCTGCTGGT GATTGGTAGT GCGGCGGGTA TCATCGCCAT GAGTAAGGTG
AAAGAGCTCA CCTTCGTCAC CTACCTCAAG TATGTGCCTG CACTGGCTCT GTGTTACACC
TGTGGTTATG GTCTGACGTT GCTACTGGCC TACGAGTTCT TTGGCTAG
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| Protein sequence | MLNIFLITLA VLALLSIIFE EVTHINKAKT TLFFGCVAWI TLFVAARDPS HQHLVAEELD
HNLLEIATLW LFLMSTMTFV AYLNAKGMIQ ILVQKLFPQK VSVRMLMIQV ALFSLVLSAI
CDNVTATLVS LGLLTTFQLE SQMKRRMSVL IIFAVNSGGV ALITGDVTTL MIFLGGHVHI
SQLLMLFIPA AASVMLLAVL FSLKAEGYVS TTPIKRQYSK LDVFIALIFL ITIIMTMVLN
IFFGIPPVLT FLSGLSVMFL MGTLQRSNKE ELQILEYIRQ VEFETLLFFL GILLLVGMLK
EIGTLHLLTE VYAKFDPNIS NFVTGIGSAI LDNVPLTAAL LKAEPVLNTP EWLGLTYSVG
VGGSLLVIGS AAGIIAMSKV KELTFVTYLK YVPALALCYT CGYGLTLLLA YEFFG
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