| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1007 |
|---|
| Symbol | |
|---|
| ID | 4920790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1164241 |
|---|
| End bp | 1164507 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640162540 |
|---|
| Product | major outer membrane lipoprotein, putative |
|---|
| Protein accession | YP_001093137 |
|---|
| Protein GI | 127511940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000269001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA AAGTACTGAT GATTGCTGGC GTAGCAATGA CTGCCCTTCT TGGTGGTTGC
GCAAACACTA CTGCTCTAGA AGAAAGCGTT GCTAACCTAG GCAACAAAGT TGATCAATTA
TCAGCTGAAG TTAGCTCTCT GAAGTCTGAG CAAGGTGCTC TTGCTGCTGA CGTTAAAGAT
GCAAAAGCTG CTGCGATGGA CGCACAAGCT GAAGCTAAGC GTGCTAACGA CCGCATCGAC
AACATCGCTT CTTCTTACAA GAAGTAA
|
|---|
| Protein sequence | MNKKVLMIAG VAMTALLGGC ANTTALEESV ANLGNKVDQL SAEVSSLKSE QGALAADVKD
AKAAAMDAQA EAKRANDRID NIASSYKK
|
|---|
| |