| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1005 |
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| Symbol | |
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| ID | 4920623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1162084 |
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| End bp | 1162908 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162538 |
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| Product | rRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001093135 |
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| Protein GI | 127511938 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000007859 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTC ATTATTTGTG TCCCCTCTGC CAAGCGCCGC TGATGGTGCA TCAAGGCAGC
CAGGGGCTAC ACTGCGCCAA CAAGCACCAT TTCGACAAGG GGCCGCAGGG GTACTGGGTG
TTCAGTCAGC CCAAGAAGCC CCATATCGAT TCGCGGCAGT TGATGCGTGC CAAACACTTT
CTGTTGGAAT CGGGTATCTT CGCCCCCGTG GTCGAGGCCA TTCAGCGTCA GCTAACTGAG
CGATTGCCGA GTGATGCCAC GTTGTCGCAT CTGGATGTCG ACAGCGGCGA GGGTTATTAC
CTGCGGGCGC TGGCTGGTGT GTTTAACGCG CTTGGCCAAG CCGTTGAACA GACAGGTGTC
GCCGAGGCGG AGAACGCCCT GTTTGTGGCG GCAAAGGCGC AGCCTGAGGC CAATCTGGTT
CAGAGCCAGC TCAAGGTGTT ACCCTTCGCC GATGACAGCT TCGATCTGGT GAGCCTGTTC
GATAAGCCGC TCAAAGGCAA GGAGCCGCTG CGGGTGCTTA AACCCGGCGG CACCTTTATC
TGGTTATCGC CGGGCCCGCG TCACCTGTGG CAGATTAGAG AATTTATCTA TCCTAACTTA
ACCGAGAAAG GCGGTGAGCC GCAGCAGCCT AAAGGTGTCA CCCTGGTGGC GAGCGAGCAC
ATTACTTATT CCCTGGCGCT CAGCGGCGAG CAGGCGCTGA CGTTGCTGGA GATGACCCCC
TTTGCCTGGC GGGCCAACGA TAAGATAAAG CGGCAGATCA CTCAGCAGGA GTTTGCGGCG
CTGGAGATAG ATCTCTATCT CACCCTGGCG ACGAAAGATG CTTAG
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| Protein sequence | MNSHYLCPLC QAPLMVHQGS QGLHCANKHH FDKGPQGYWV FSQPKKPHID SRQLMRAKHF
LLESGIFAPV VEAIQRQLTE RLPSDATLSH LDVDSGEGYY LRALAGVFNA LGQAVEQTGV
AEAENALFVA AKAQPEANLV QSQLKVLPFA DDSFDLVSLF DKPLKGKEPL RVLKPGGTFI
WLSPGPRHLW QIREFIYPNL TEKGGEPQQP KGVTLVASEH ITYSLALSGE QALTLLEMTP
FAWRANDKIK RQITQQEFAA LEIDLYLTLA TKDA
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