| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1003 |
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| Symbol | |
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| ID | 4920575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1160725 |
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| End bp | 1161216 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162536 |
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| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
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| Protein accession | YP_001093133 |
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| Protein GI | 127511936 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
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| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.013683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TCTTCATCAG CATTGGCAGT AATATTCACC CTGAGGGCTA CTTTAACGCC
GCCCTCAAGG CCTTAAGCAC TCACTTCGAT AACCTATGCC TCTCCAGCGT CTTTGAGAGC
GAGGCGGTCG GTTTCGATGG CAGCAATTTT CTCAACATGG TGGTCGCCGC CGATACCCAG
CTTGGTATCG CCGAGGTGGT GGCGCTGTTT AAACAGATAG AGTCGGATAA TGGCAGGCTG
CCGGGGGCGA AGAAGTTTAG CCCTCGCACC CTAGATCTCG ACCTGCTGCT CTATGACGAC
TTGGTGACCG AGACGCCCAT AGTGCTGCCG CGCGCCGAGA TCACCACCAA CGCCTTCGTG
CTCTGGCCGC TGGCGGAGAT CGCCCCCGAG CGGGTCCATC CCGTGGCGCA GCTTTCTTAT
CAGACCCTAT GGGACAATTA TGATAAGTCG CAGCAGAAGC TGTGGCCTGT CGAATTTCAA
TGGTCTTATT AA
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| Protein sequence | MARIFISIGS NIHPEGYFNA ALKALSTHFD NLCLSSVFES EAVGFDGSNF LNMVVAADTQ
LGIAEVVALF KQIESDNGRL PGAKKFSPRT LDLDLLLYDD LVTETPIVLP RAEITTNAFV
LWPLAEIAPE RVHPVAQLSY QTLWDNYDKS QQKLWPVEFQ WSY
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