| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0995 |
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| Symbol | |
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| ID | 4922763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1151992 |
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| End bp | 1152966 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640162527 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001093125 |
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| Protein GI | 127511928 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0268254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGAC GGCGGAAATC GGACAATCAT TTACCTCCAA AGGTGTATCA GCGCTCAGGT
AGTTATTACT TCGTTGATAA AGATGGTAAG TGGATTAAGT TGGCCTCCAG CTACCCCGAG
GCAATGGTTA AGTATGCAGA AATTGTTGGC GATGTTGGAA ATCTGGTTAC CGTTAGTGAT
CTGCTGGATC GCTACCTGCG GGAAGTGGCT CCGCTGAAGG CCGAGGCTAG CTACAAAAGT
AATCTGGCGC AGTCAAAATT TTTGCGAGCA GGTCTGGGAG ATATTCGGGT GGATGAGCTG
ACGCCACGGC ACATCTACCA ATATATGGAT GTGCGAGGAA AAAAGGGGAA AACACAGACA
AATCGTGAGA TTGCAATGTT GTCCCACATG CTCAAATATG CCATTCGCTG GGGATTGATC
GATCACAATC CCTGTCGCAG TGTTATGCGC TTTAAAGAGA CACCCAGAGA TCGCTATATT
GAGGATAAAG AATATAAAGC ATTCAGAGAT TTTGCAGGCC CCCTAATTGC CGCGTATATG
GATTTTAAGC TTCTAACGGG GCTCAGAAAG TCGGACATTT TGAAGTTAAG GCGAGATGCA
CTGAAAGAGG ACGGGATTCA TGTTTTGATC AACAAGACGA AGCGGAAAAT CATTATCTCT
TGGTCAGATC ACCTTCGGGC CGCAGTGCAG GCGATTAAAG ATTTGCCTCG CCCGATTAAC
AGTATTTATT TGTTTTCAAC GCGAAAGGGC CAGCCTTACA CGACTGATGG GTTTTCATCC
ATCTGGCAGC GAAAGATGGT CAAAGCGATG GAAAAAGGTA TATTAACGGA ACGGTTCACC
GATCACGATG TGAGAGCTAA GACAGGAAGC GATGCGGAGT TAGAGCATGC TACCAGGTTG
CTGGCTCATC TCGATGCGAA GGTGACCCAG AAACACTACA GAAGAAAGAC AGCAGTAGTG
CGTCCTTTGA TGTAG
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| Protein sequence | MGRRRKSDNH LPPKVYQRSG SYYFVDKDGK WIKLASSYPE AMVKYAEIVG DVGNLVTVSD
LLDRYLREVA PLKAEASYKS NLAQSKFLRA GLGDIRVDEL TPRHIYQYMD VRGKKGKTQT
NREIAMLSHM LKYAIRWGLI DHNPCRSVMR FKETPRDRYI EDKEYKAFRD FAGPLIAAYM
DFKLLTGLRK SDILKLRRDA LKEDGIHVLI NKTKRKIIIS WSDHLRAAVQ AIKDLPRPIN
SIYLFSTRKG QPYTTDGFSS IWQRKMVKAM EKGILTERFT DHDVRAKTGS DAELEHATRL
LAHLDAKVTQ KHYRRKTAVV RPLM
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