| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0982 |
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| Symbol | |
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| ID | 4923552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1131481 |
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| End bp | 1133007 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640162514 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093112 |
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| Protein GI | 127511915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT GCTTTAAATA TGGGGTTATT GTTTCTCAGA TAGCCTTGAT CGGTTTAAGT
TTCTCTATAC AAGCCAAGGA AAATAATGAT TTTTCCTCTA TGCAGATGAA AGGGGTTGAG
CAGGTGTCGG TGAAGGTAGA CCTAGACCCT GCGGTTGAGC GTTTGTCTAA GGCGGTGCAG
TTTCGCACCA TCTCGAATCA AGACAGAAAT GACTTCGATG AGAAGGCTTT TACCGACTAT
CATCAGTTTT TAGAAAAGGC CTACCCCAAT GTGCATAAGA CGCTCAAGCG TGAGGTATTA
GGCTCTCCCC GTCCATTTAG TCTGTTATAT ACCTGGAAAG GTAAAGATCC CTCCCTGCCA
CCTGCGCTGT TTTATGCGCA TCAAGATGTG GTACCTGTCC CGAGTGAGTC GAGAGACCAG
TGGGCCGTCG ATCCCTTCGC CGGTGCGGTG CAAGACGGTT ATATCTGGGG ACGAGGCGTC
TTAGACGATA AAAATCAGAT CCACGGCATC TTAGAGGCGG CCGAGATGAA GATTAAGGAG
GGGTGGCAGC CGTCACGTAC TCTTTATTTC GTCTTTGGTC AGGATGAAGA GGTGGGTGGA
CCCGAAGGGG CCAAGTATAT TGCCGATGTG TTAGAGCAGC GCGGCATCAA GCGATTTGCC
TTCGTCATTG ACGAGTCGGC GCCGCTGACT CCGGGTATCT TCCCCGGCAT TCCTGATAAC
ACAGCCCTGA TCGGTATTGC CCAGAAAGGC TTTGTGAGTC TCGAACTGGC GATGAATGGC
ATAGGTGGTC ATTCCTCTCA GCCGCCTGAA GAGTCCAATA TCGGTATTCT GGCTAAAGCC
ATTACCAAGC TGGAGGCGGC GCAGTTCCCC TATCGTATCC ATGAGGCGGT GCGTCATCAG
TATCGCTATA TGGGCCCTGA ACTGAGTGAA GATAAACAGC CTATGTATGC GGCGGTGGCT
TTTGGTAAGG ATGGTGAGAT CACCCCATTG GAGCAGAAGT TTATCGATGA GATGGCGAGC
CAGCAGGTGA CCCGAGCCAT GTTGCATACC ACCATTGCGG TGACTATGTT TAATGCTGGC
ATCAAAGATA ACGTGTTACC GCCTTCGGCC ACGGCCGTGG TGAATTTCAG ACCCATGCCG
GGTGATACGC CTGAAGTGAT CATTGCCCAC GTTAAGAAAG CCATAGGTGA CGATCGCATC
ACGGTAAGGG ATATCTCGGC GTCGACTCCC GCAACCAATG TGGCCGACCC GAGTAGCAAG
AGTTATCAGC AGCTTGAGAA GACCATACGT CAGATCTACG GCAACGATCT CATCGTGTCG
CCTTTCTTCG TGATCGGTGG CTCAGACTCT AAGCACTTCC AGGCACGTAA GTTTGCCCCT
GATGTTTATA CCATTACCGG CTTGCAACTG GAGTCGGTGA AGGAGTTCGC CGGATTCCAT
GGTGTCAATG AGCGTATTCG TGTCGATGAA TATGGCCGCA CCATAGGTTT CTTCTACAAG
TTGATGGATA ACTTAGAAGA ACTGTAA
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| Protein sequence | MAKCFKYGVI VSQIALIGLS FSIQAKENND FSSMQMKGVE QVSVKVDLDP AVERLSKAVQ
FRTISNQDRN DFDEKAFTDY HQFLEKAYPN VHKTLKREVL GSPRPFSLLY TWKGKDPSLP
PALFYAHQDV VPVPSESRDQ WAVDPFAGAV QDGYIWGRGV LDDKNQIHGI LEAAEMKIKE
GWQPSRTLYF VFGQDEEVGG PEGAKYIADV LEQRGIKRFA FVIDESAPLT PGIFPGIPDN
TALIGIAQKG FVSLELAMNG IGGHSSQPPE ESNIGILAKA ITKLEAAQFP YRIHEAVRHQ
YRYMGPELSE DKQPMYAAVA FGKDGEITPL EQKFIDEMAS QQVTRAMLHT TIAVTMFNAG
IKDNVLPPSA TAVVNFRPMP GDTPEVIIAH VKKAIGDDRI TVRDISASTP ATNVADPSSK
SYQQLEKTIR QIYGNDLIVS PFFVIGGSDS KHFQARKFAP DVYTITGLQL ESVKEFAGFH
GVNERIRVDE YGRTIGFFYK LMDNLEEL
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