| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0978 |
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| Symbol | |
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| ID | 4921440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1123249 |
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| End bp | 1124187 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162510 |
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| Product | band 7 protein |
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| Protein accession | YP_001093108 |
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| Protein GI | 127511911 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC TACCTAAGGA TATCGCCAAC CTATCGACGA TAAAGACCAA AGGCAAAGGC
GCCCTGGTGT TAATCGCCGG CCTGCTTTTC GCCCTCGTCC TGTTCAGCCA GACCATGTAC
ACGGTCGATG AGGGCCATGT GGGCATCATC AAGCGTTTCG GCCAGGCCAC AGAACAGGTT
AATCCCGGCC TGCACGTTAA GATCCCCTTT GTCGACAAGG TCGAAGTCTT AGAGATACGT
ACCCGCAAGA ACGTCGAGAA GCTCAACGCC TCGACCCACG AACAGATGCC AGTCACCGCC
GAGGTGTCCA TCAACTGGAC GGTCAATCGC GATCAGGCCT TCGACCTGTT TAAGAGCTAT
GGTGGCCTGA GCCAGTTCGA ATCGCGCATC CTGGACCCTA AGCTGAGATC CGCCGCCAAG
GATGCCCTGG CGCGTTACAA GGCCGAGGAG ATCATCCAAA ACCGCAGCCG GGTGATCGCC
CAGATAGAAG ATTTTCTTGT CGAGGAGATG AAGGAGTACC CGGTCAAGCT GGACTCCGCC
CAGCTGGAAA ATCTTGGTCT TCCGCAGAAG TATATCCAGT CTATCGAGAC CAAACAGACA
GAGAAAAACC TCGCAGCCGC CGAGAAACAC CGTCTGGAAA GACAGAACCT GGAGGCCCAG
CGTGAGGTGA ACACGGCGAA CGCCAAGCGT GACGCCGCCA AGGCCACTGC CGACGGTAAA
GCCTACGCCA TTCAGACAGA AGCGATTGCC GAGGCGGAAG CGATTCGCCT CAAGGGTATC
GCAGAAGCAG AAGCGATCAA GAAGAAGGCC GAGGCGCTGA GAGAATCTCA GACTCTGGTG
GATTATGTGC GCGCCCAGCA GTGGAACGGT CAGATGCCCA CCACCATTAT GGGCAGCGAC
CAGAGCGTGC TGTGGAACAT GAGCAGCAAG AAACAGTAA
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| Protein sequence | MTTLPKDIAN LSTIKTKGKG ALVLIAGLLF ALVLFSQTMY TVDEGHVGII KRFGQATEQV
NPGLHVKIPF VDKVEVLEIR TRKNVEKLNA STHEQMPVTA EVSINWTVNR DQAFDLFKSY
GGLSQFESRI LDPKLRSAAK DALARYKAEE IIQNRSRVIA QIEDFLVEEM KEYPVKLDSA
QLENLGLPQK YIQSIETKQT EKNLAAAEKH RLERQNLEAQ REVNTANAKR DAAKATADGK
AYAIQTEAIA EAEAIRLKGI AEAEAIKKKA EALRESQTLV DYVRAQQWNG QMPTTIMGSD
QSVLWNMSSK KQ
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