| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0970 |
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| Symbol | |
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| ID | 4922413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1114319 |
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| End bp | 1114867 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162502 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001093100 |
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| Protein GI | 127511903 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGATATAG GCGCAAATCT CAAAGCTGTT CGTAAAATGA AAGGGTTATC GCAACGCGAG
TTGGCTAAGC GTGCCGGCGT GACCAACAGC ACCATCTCCA TGATCGAGAA GAACAGCGTC
AGTCCTTCGG TGAGTTCCCT GAAGAAAGTC TTGTCGGGTT TGCCTATGTC ACTGGTGGAT
TTCTTCTCTA TTGAGGAGAG CATGCCTACC GAGCAGAAGG TGGTCTACCG CTCCGGCGAG
CTGCTGGATA TCGGCGATGG CAACCTGGAC TACAAGTTGA TCGGCAGAGA TTACCCCAAC
CGCGCCATGT CTGTGATGAA CGAGGTCTAT CCACCTGGGT CCGATACCGG TGAAGAGATG
CTGCAGCACG AGGGTGAAGA GGCGGCCATG GTGATCGAGG GTCAGCTGGA GATCACCATA
GGCGACGAGG TCTATGTGCT GAGCGAGGGC GACAGCTACT ACTTCAACAG CGAGCTGCCA
CACAGATTCC GTAACCCCTT CGACAAGCCG TGCCGTATCG TCAGCGCCAC CACGCCGGCA
AACTTCTAA
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| Protein sequence | MDIGANLKAV RKMKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGLPMSLVD
FFSIEESMPT EQKVVYRSGE LLDIGDGNLD YKLIGRDYPN RAMSVMNEVY PPGSDTGEEM
LQHEGEEAAM VIEGQLEITI GDEVYVLSEG DSYYFNSELP HRFRNPFDKP CRIVSATTPA
NF
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