Gene Shew_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0961 
Symbol 
ID4923294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1105045 
End bp1105389 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content50% 
IMG OID640162493 
Producthypothetical protein 
Protein accessionYP_001093091 
Protein GI127511894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA CCCTATTGAA AATCGCCTTT ATCCTAGTGG GCCTCTTTCT GATCTACAAG 
CTGATCTTCT CAGGCAAACG TGGCTTAAGC CTTTTTGAGA TGCATTTTAA AGATGGCCGT
CTCATCTCCC ACAAGGGCAA GATCCCGGAG AAGTTTCAGC GGGAATGTAA AGCCATCGCC
AAGAGTGAGA AACTGACCTG TGTGGTACGC GCCGAGAAGA GTGGCAGCGT CAGACTGCAT
GTGTCGGCCA ACGTCAGCGA TGCCATCATT CAGCGCATCC GCAACCAATT TCCGTTCGAA
TACTACGACA AGAAAACCGT CGATAATTCG CGTCAGGCAG GCTAG
 
Protein sequence
MTETLLKIAF ILVGLFLIYK LIFSGKRGLS LFEMHFKDGR LISHKGKIPE KFQRECKAIA 
KSEKLTCVVR AEKSGSVRLH VSANVSDAII QRIRNQFPFE YYDKKTVDNS RQAG