| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0952 |
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| Symbol | |
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| ID | 4922026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1094196 |
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| End bp | 1095983 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162484 |
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| Product | peptidase M24 |
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| Protein accession | YP_001093082 |
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| Protein GI | 127511885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTG TAACCGCACA ACGTCTAGAC GCCGTAAGAA GTGACATGCT CAGCCAAACC
CTCGATGCCT TCATCGTGCC CCGGGCCGAC GAATATCTGG GCGAGTATGT CCCCGAGCGT
AACGAAAGAC TGCACTGGCT CACCGGCTTT ACCGGTTCGG CGGGCATGGC CATAGTGCTC
AAAGAAAGCG CCGCCATCTT CATCGATGGC CGTTACACGG TTCAGGTCAA GCAGCAGGTA
GACAGTGCTC AGTTCGATTA TCAGAGTCTC ACCGACACGC CGCAGATCCC TTGGCTCATC
GCCCAGCTAA GCGCAGGCGC TCGCATCGGC TACGACCCGC GCCTACATAC CCTGAGCTGG
CAACAACAGG CCGAGGCCCA GTGTCAGCGC GCCGGTATCG AGCTGGTTGC CGTGGCAGAC
AACCCTATCG ATCGCCACTG GCAAGAGCGC CCCGCCGCCT CCAGCGCCGC CATCAGCCTG
TTTAGCGAGC AGAGCGCCGG CATCAGCAGC ACCATGAAGC GTGAGCAGAT AGGTAAGGCC
GTGGCCGCAG TTGGCGCCGA TGTGGCGCTC ATCAGCGCAC TGGACTCCTT CTGCTGGCTG
CTGAACATTC GCGGCAGCGA CGTACCTCGT CTGCCCGTGG TCTTAGGCAC GGCCCTGCTG
TATAAGAATG GCGAGATGAC ACTCTTTACC GATCTCGCCA AGCTACCAGA GGGGATCCAG
GCCCATGTGG GCGCAGGTGT GAGCTTCATG GCCGAGACCG AACTCGAAGG CGTGTTATCT
AAATTCGATG GCGTCAAGCT ACTGGCCGAC CCAGACAGCG CCAACGCCTG GATGCAGCTA
ACGGCAAAGC AAGCCGGTGC CAGGCTGATC GCTGGACAAG ATCCGGTTGC CCTGCCCAAG
GCGCAGAAGA ATCCGGCCGA ACTCGCCGGC CTTAGCGCCT GTCATATTCG CGACGGCGTG
GCCGTGAGCC GTTTCCTCGC CTGGCTCGAC GTCGAGGTAG CCGCCAAGCG TCTCTATGAC
GAAGGCACCC TGGCCGATAA GCTAGAGAGC TTCCGCCTGG AAGATCCCCT GTATCGCGAG
CCAAGCTTCG ACACCATCTC GGCCGCAGGC GCTAACGCCG CCATGTGCCA CTACAACCAC
AACAATGGCA CCCCAGCCAT GATGACCATG GACAGCATCT ATCTGGTGGA CTCGGGCGCC
CAGTATCTGG ATGGCACCAC AGACGTTACC CGCACCATAG CCATCGGCGA GGTCACCGAC
GAGCAGCGTA AGATGGTCAC CCTGGTATTG AAGGGCCATA TCGCTTTGGA TCAGGCCAGA
TTCCCTAAAG GCACCACGGG CCAACAGCTC GACGGCTTCG CCCGCCAATA CCTGTGGCAG
CACGGCTTCG ATTATGACCA CGGCACTGGC CACGGCGTGG GCCACTTCCT CAGCGTCCAT
GAGGGGCCAC AGCGCATCGC CAAGAACAGC AATGGCGTCG CCCTGCTGCC GGGCATGGTG
GTGTCGAACG AGCCGGGCTA CTACCGCGCC GATGCCTTTG GTATTCGTAT CGAAAACCTC
ATCACGGTGC AGGCCTGCGA GGCCCTGGCC GGCGCCGAGC GTGAGATGTA TGAGTTCCAT
GCCCTCACCC TGATCCCGAT CGACACTCGT CTTATCGATA AGCAGCTGCT GAATGACGCC
GAGATCAACT GGCTCAATGG CTACCATCAG AGAGTCAGAG AGACCCTGAG CCCGCTGATG
CAAGGCACTG AGCTCGACTG GCTACTCAAG GCGACCGAAG CTATATAA
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| Protein sequence | MTSVTAQRLD AVRSDMLSQT LDAFIVPRAD EYLGEYVPER NERLHWLTGF TGSAGMAIVL
KESAAIFIDG RYTVQVKQQV DSAQFDYQSL TDTPQIPWLI AQLSAGARIG YDPRLHTLSW
QQQAEAQCQR AGIELVAVAD NPIDRHWQER PAASSAAISL FSEQSAGISS TMKREQIGKA
VAAVGADVAL ISALDSFCWL LNIRGSDVPR LPVVLGTALL YKNGEMTLFT DLAKLPEGIQ
AHVGAGVSFM AETELEGVLS KFDGVKLLAD PDSANAWMQL TAKQAGARLI AGQDPVALPK
AQKNPAELAG LSACHIRDGV AVSRFLAWLD VEVAAKRLYD EGTLADKLES FRLEDPLYRE
PSFDTISAAG ANAAMCHYNH NNGTPAMMTM DSIYLVDSGA QYLDGTTDVT RTIAIGEVTD
EQRKMVTLVL KGHIALDQAR FPKGTTGQQL DGFARQYLWQ HGFDYDHGTG HGVGHFLSVH
EGPQRIAKNS NGVALLPGMV VSNEPGYYRA DAFGIRIENL ITVQACEALA GAEREMYEFH
ALTLIPIDTR LIDKQLLNDA EINWLNGYHQ RVRETLSPLM QGTELDWLLK ATEAI
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