| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0951 |
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| Symbol | |
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| ID | 4921310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1092897 |
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| End bp | 1094096 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162483 |
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| Product | response regulator receiver modulated diguanylate phosphodiesterase |
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| Protein accession | YP_001093081 |
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| Protein GI | 127511884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAA ATGTCTTGAT CGTCGATGAT TCGCTGAGCG CCTGTCGGGT GCTCAGCCGT
CACTTTTTGC TGCTGGATGT GGACAAGGTG GAGTTCTGCC GCGATGCCCG CAGCGCCATT
CGAACCTTAA GTAAATATAG CGATGACTAC CAGATAGTGG TGGTAGACCT GCATATGCCC
GAAGTCGACG GCATAGAGTT TCTGATGCGT CTGAGTAAGA TGGAGTTTAA GGGGGGGATC
ATCATCGCCT CTGGCATGGA GTCGCGTATC GTCGAGGCCG CCTCCCAGCT GGTGGAGGCC
TCCAAGCTCA GGCTGCTGGG CGCCCTGATG AAACCAGTTA CCACGGAGCA GCTCAGGGTC
TGTGTCGAGC GATATCGCCT GATGGCCTTT CAGGGCAACG GTGTACGCCA CAAGGGATTG
ATGAGCATCG ACGAGATCCG CCGCGCCATC AACTCCAATA AGATCATTCC CTATTATCAG
GCACAGGTGG ATATCGCCAG CGGCAAGATA AAGGGGTTCG AGGTGCTGTG CCGCCTGCAG
CAGGGCACTC GCTTGCAGTT GATCACCCCA GATAAGTTTA TCGATGTGGC CGAGTGCAAC
AATGCCCTCA ACAGCCTGAC CACTAAGCTG CTGAACAATG CCATCCCAGA GTGGGCGCTG
ATCAGCCAGT TCGAATCTTG CAAACAGTGC CACCTGTCGA TCAACCTGAC TCCCAAGCAG
CTCAATCAGA GCGGCTGGCA TACCCGCCTG ATGCAGTATT GCGAGCAAAA CCTCTTATCG
CCGTCGCGCC TGACGGTGGA GATCACCGAA AATCAGGTGC TGGATAAGCA GCGTCAGCAC
TCTACCATCA GCCAGCTGAG GATGAACCGT ATCGGCGTCG CCATAGACGA CTTCGGTACC
GGTTATACCA ATCTCTCCCA GCTGTGCACC CTGCCTATCA GCGAACTGAA GCTGGACCGC
AGCCTGGTTC ATGGCATACA TAAAGACCCT GTCTCTCAGA CCATACTGAA ATCTATGCAG
GCGATCAGTG GCAAGCTCGG CATTCATCTG GTGGCCGAGG GAGTAGAGGA TATCCATGAT
CTCAACTACC TGGAGCAGAT AGAGGATATC TCCTTGCAGG GCTATCTCAT CTGCCGTCCT
AAACCCTACA GCGAGCTGGT GCGCTGGTTA AAGGCCCGCG AGCGCTTGGT TCAGGCCTGA
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| Protein sequence | MSINVLIVDD SLSACRVLSR HFLLLDVDKV EFCRDARSAI RTLSKYSDDY QIVVVDLHMP
EVDGIEFLMR LSKMEFKGGI IIASGMESRI VEAASQLVEA SKLRLLGALM KPVTTEQLRV
CVERYRLMAF QGNGVRHKGL MSIDEIRRAI NSNKIIPYYQ AQVDIASGKI KGFEVLCRLQ
QGTRLQLITP DKFIDVAECN NALNSLTTKL LNNAIPEWAL ISQFESCKQC HLSINLTPKQ
LNQSGWHTRL MQYCEQNLLS PSRLTVEITE NQVLDKQRQH STISQLRMNR IGVAIDDFGT
GYTNLSQLCT LPISELKLDR SLVHGIHKDP VSQTILKSMQ AISGKLGIHL VAEGVEDIHD
LNYLEQIEDI SLQGYLICRP KPYSELVRWL KARERLVQA
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