| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0947 |
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| Symbol | |
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| ID | 4924106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1087950 |
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| End bp | 1089449 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162479 |
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| Product | carboxypeptidase Taq |
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| Protein accession | YP_001093077 |
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| Protein GI | 127511880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2317] Zn-dependent carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA ACAAGCAAGA TTCGGCGACG CCGCACTACG ACGCCCTGTG CGCCGCCTTT
AAACAGATCC ATCACTTCCA GCACCTGCAA GCCCTGGGCG ACTGGGACCA GGCCACCATG
ATGCCAAGTG GCGGCAGCCA AGGACGGGGT GAGGCGATGG CCGAGCTGGC TCTGCATATT
CACACACTCA AGACCGCCCC AGGTCTGGTG GATGGATTAG CCGCGGCAGG CGAAGAGGCC
TTAACCGCGT CGCAGAAGGC CAACCTGAGA GAGATGCGTT ATCACACGCT GCAGGCCACC
GCCCTGCCCG GCGAGCTGGT GCAGCAGAAG ACGGCGCTCA CCTACGCCTG TGAGCATGCC
TGGCGTCAGC AACGCAAAGA CAACGACTGG CAGGGCTTTC GGCCAAATCT GGAGAAGGTG
ATCGCCCTGG TGCGCGAAGA GGCACAGATC CTCGGCGAGG TTCAGGGACT CTCCCCCTAT
GACGCCCTGC TCAATAAGTT TGAGCCAGGT TGTCAAACGG CGGCGCTGGA TAAGGTATTT
GGCGAGCTGA GAACCTGGCT GCCCGAGATG ATCCAGCAGG TGCAAGCCAA GCAGCAGAGC
TGGCCATTGG CACCTGTGCC TCACAGTAAG GCCTCAGCCC AGCAAGCCCT CAACCTGGAT
GTGATGAAGC TACTCGGCTT TGATTTTAAT CAGGGTCGTC TGGATACCAG CAGCCACCCC
TTCTCAGGCG GCGTGCCCGG CGATGTGCGC ATCACCACCC GCTATGATGA AGCCGATTTT
GCCACCTCCC TCTATAGCAC CATCCACGAG GTAGGCCATG CCCGCTACGA GCAGGGCCTA
CCCATCGACT GGCGTGGCCA ACCTGTTGGG CTGGCGCGAT CCATGGCGCT TCACGAGAGC
CAGAGCCTGT TCTTCGAGAT GCAGCTCGCC AGAAGCCCGG CGATGATTGC CCTGCTGACA
GAGAAGATTA ATCATCATCT GGGCAGCCAA CTCACTCAGG AGTCCCTGAT ACACCTGGTG
CAGCGTGTGA CACCTGGTCT TATCCGGGTC GATGCCGACG AGGTGACTTA CCCTTGCCAC
ATCATGCTGA GATATGAGGT GGAGAAAGGC CTAATCGACA AGAGTCTGCA GGTCGCCGAC
CTTCCCGAGT TCTGGGACAA TCAGATGCAG AGCCTTTTGG GGCTATCCAC CCGCGGGGAC
GATCGCAACG GCTGCATGCA GGATATCCAC TGGCCTGTAG GCGAGCTGGG GTACTTCCCG
AGTTACAGCC TGGGCGCCAT GTACGCGGCC CAGTTTAAGG CGAGCATGGT CAAGGCGCTG
GGCGATATCG ACAGCCTGAT TGAGCAGGGC AATATCACCC AAGTTATGGA TTGGCTCAAC
CAAAACATCT GGTCTCAAGG ATCGCTTCTG ACCACAGATG AGCTGGTGAC GCAAGTGACC
GGCGAAGTGC TAAACCCGGT TCACTTCAAG CGTCATCTGG AGCAGCGCTA CTTAAGTTAA
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| Protein sequence | MTANKQDSAT PHYDALCAAF KQIHHFQHLQ ALGDWDQATM MPSGGSQGRG EAMAELALHI
HTLKTAPGLV DGLAAAGEEA LTASQKANLR EMRYHTLQAT ALPGELVQQK TALTYACEHA
WRQQRKDNDW QGFRPNLEKV IALVREEAQI LGEVQGLSPY DALLNKFEPG CQTAALDKVF
GELRTWLPEM IQQVQAKQQS WPLAPVPHSK ASAQQALNLD VMKLLGFDFN QGRLDTSSHP
FSGGVPGDVR ITTRYDEADF ATSLYSTIHE VGHARYEQGL PIDWRGQPVG LARSMALHES
QSLFFEMQLA RSPAMIALLT EKINHHLGSQ LTQESLIHLV QRVTPGLIRV DADEVTYPCH
IMLRYEVEKG LIDKSLQVAD LPEFWDNQMQ SLLGLSTRGD DRNGCMQDIH WPVGELGYFP
SYSLGAMYAA QFKASMVKAL GDIDSLIEQG NITQVMDWLN QNIWSQGSLL TTDELVTQVT
GEVLNPVHFK RHLEQRYLS
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