| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0941 |
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| Symbol | |
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| ID | 4924110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1082446 |
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| End bp | 1083504 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162473 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001093071 |
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| Protein GI | 127511874 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00480022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTC TAGATTTATA TATCGCCCGT GTCCTGCTGA GCACCTCGGC CCTGTGTCTG
CTGGTGTTAA CTGGCCTGTC TGGCATCATC AAGTGGGTGG ATCAGATTCG TCTGGTGGGA
CGCGGTACCT ACACCATGGT GGATGCCGGC ATCTATGTGC TGTTTCTGAT CCCGCGGGAT
ATCGAGATGT TTTTCCCCAT GGCGGTGCTC CTCGGGGCGC TGATCGGCAT GGGCATGCTG
GCGTCGAACT CTGAGCTGGT GGTGATGCAG TCGGCGGGCT TGTCTCGCTT TCAGATCACC
CTGTCGGCGA TGAAGACGGC GGTGCCGCTG ATGCTCTTGG TGATGGCCCT GGGGGAATGG
GGCGCGCCGG TGGCCGAACG TCACGGCAAG GAGCTGCAGG CGGTTAAACT CTCCGGCGGT
AGCCTGTTTA AGTCGAGCCG GGGGATCTGG GCCAAAGATG GTGACCTGTT CGTTAACATA
GGCGAGATAG AGGATATCAA CAGCCTGCAC AATATCGTGC TCTATGAGTT CGACGATAAA
CTGAATCTGG TGGGCACCAT AGAGGCGCGC CGTGGCGTTT ACTCTAAGGA TCATTGGCGC
CTGCTCGATG TGCGTCAGAC CAAGATCACT CCAGAGCAGG TGAGCCTGAC GGATCTCACC
CTGTATCGCT GGGAGTCGAC TCTGACCCCG GATAAGCTGA GCGTAGTGTC GGTAAAACCC
GAGGCCTTGT CGATTCAGGG GCTGGTGGAT TATCTCGAGT ACCTGAGGGT GAATAACCAG
GATTCGGGCC GCTATGAGCT GGCACTATGG CGTAAGATCA TGCAGCCTAT CACTGTGGCC
GTGATGATGC TGGTGGCCCT GTCATTCGTG TTTGGTCCGC TGCGTACTGT GACCATGGGC
GCGCGGGTGC TGCTGGGTGT CGTCGCTGGT TTCAGCTTCT ATATCTGTAA CGAGATCTTC
GGCCCCATGA CTCTGGTGTA TGGCCTACCG GCCGTGCTGG GCGCCGTGAT GCCGCCGCTT
ATCTTCAGTA GCGCGGCCAT CTACTATATT CGCCGCTAG
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| Protein sequence | MRILDLYIAR VLLSTSALCL LVLTGLSGII KWVDQIRLVG RGTYTMVDAG IYVLFLIPRD
IEMFFPMAVL LGALIGMGML ASNSELVVMQ SAGLSRFQIT LSAMKTAVPL MLLVMALGEW
GAPVAERHGK ELQAVKLSGG SLFKSSRGIW AKDGDLFVNI GEIEDINSLH NIVLYEFDDK
LNLVGTIEAR RGVYSKDHWR LLDVRQTKIT PEQVSLTDLT LYRWESTLTP DKLSVVSVKP
EALSIQGLVD YLEYLRVNNQ DSGRYELALW RKIMQPITVA VMMLVALSFV FGPLRTVTMG
ARVLLGVVAG FSFYICNEIF GPMTLVYGLP AVLGAVMPPL IFSSAAIYYI RR
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