Gene Shew_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0931 
Symbol 
ID4920566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1065058 
End bp1065858 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID640162463 
Producthypothetical protein 
Protein accessionYP_001093061 
Protein GI127511864 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACC GACAAGCCGC CGTCGCCGGG CGATTCTATC CGGCAGAACC AGGACTACTC 
ACCCAGCAAC TTATCCACTA TTTCGGCGAG GCCCCCAGCG TTCACATTAT CCCTAAGGCC
CTCATCCTGC CCCATGCGGG CTATCTCTAT TCCGGCGAGG TGGCCGCCAA GGCCGTAAAC
CTGCTGCGCA ACCACCCAGA CGGCTATCGA CGCGTCGTCC TGCTGGGCCC CAGCCACTAT
GTGGGCCTCA ACGGCTGCGC CCTGCCCCGC AGCGACAGTT TCATCACCCC CTTGGGTGAG
ATCCCCATCG ACAGAGTAGG CATAGAGCTG CTGCTCAACC GGCGTCTCGC CATCGCCTCC
GACATGGCCC ATCAGAGAGA ACACGCCCTG GAGGTGGAAC TGCCGCTACT GCAATTCTGT
CTGGACGACT TCATCCTGCT GCCCGTGGTG GTGGGCGGCG CCAGCCCAGA AGCCGTGTGC
CAGCTGATCC AGGCGGTCGC CGATAGCGAT ACCCTGATCG TCGTCAGCAG CGATCTCAGC
CACTATCACC CCTATCTGGA TGCCAACCGG ATAGACACAG ATACCCGCAG CCACATACTG
GCGCTCGACC CACACCTGGC ACCGGAACAG GCCTGTGGCT GTCATGCCCT CAACGGTCTG
CTGGCCTATG CCAAGCTAAT GAATTGGCAG ATAAAATGCG TCACCCACAC CAACTCGGGT
GACGTGACCG CGCGCGCCCA GGCCCGCCGC CCGAGGGATG ATGAGGAGGT GGTCGGCTAT
GCCAGCTTCG CCCTCTATTG A
 
Protein sequence
MKYRQAAVAG RFYPAEPGLL TQQLIHYFGE APSVHIIPKA LILPHAGYLY SGEVAAKAVN 
LLRNHPDGYR RVVLLGPSHY VGLNGCALPR SDSFITPLGE IPIDRVGIEL LLNRRLAIAS
DMAHQREHAL EVELPLLQFC LDDFILLPVV VGGASPEAVC QLIQAVADSD TLIVVSSDLS
HYHPYLDANR IDTDTRSHIL ALDPHLAPEQ ACGCHALNGL LAYAKLMNWQ IKCVTHTNSG
DVTARAQARR PRDDEEVVGY ASFALY