| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0930 |
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| Symbol | |
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| ID | 4922359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1064505 |
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| End bp | 1065080 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162462 |
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| Product | AMMECR1 domain-containing protein |
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| Protein accession | YP_001093060 |
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| Protein GI | 127511863 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2078] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGCTT CGCCCTCTAT TGAACTGACC GCCAGCGACA AGGCCTGCCT GCTGGATCTA
GTGTGGCAGG TGATAGATGC CGGGTTAACA CAGGGTGGAT TGACGCTACC AGAGGCTCCC
GAGAGTGAGG CCCTGCTCAC CCCCGCCGCC TGTTTCGTCA CCCTACACTC TTCCGGTGAA
CTCAGGGGCT GTATCGGCCG GGTAGATGCC TGTGAGCCCC TGTGGCTGTG CGCCTGCGAA
AACGCCTATG GCGCCGCCTT TAAGGATCGC CGCTTCGCCC CACTGCGGAG TGAAGAGCGC
GAGTCGCTCA CCTTAGATAT CTCTATCCTC TCGCCGCTTA CGCCTATGGT AAACCAGGGG
GAAGCGGCCT TGCGCTCCAG CCTGCGTCCC AACATCGACG GCCTACTCAT GGATGATGGC
CACCACCGCG CCCTGTTTCT GCCCTCGGTA TGGCAGAGCC TGCCAGATCC CAAGGACTTC
GTCGCCGCCC TCAAACAGAA AGGCGGCTGG CCCCAAGATT ATTGGCGTGA CACCATCACG
CTGCAGAGGT TTACCACTCA GGTGGTGAAG GATTGA
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| Protein sequence | MPASPSIELT ASDKACLLDL VWQVIDAGLT QGGLTLPEAP ESEALLTPAA CFVTLHSSGE
LRGCIGRVDA CEPLWLCACE NAYGAAFKDR RFAPLRSEER ESLTLDISIL SPLTPMVNQG
EAALRSSLRP NIDGLLMDDG HHRALFLPSV WQSLPDPKDF VAALKQKGGW PQDYWRDTIT
LQRFTTQVVK D
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