| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0908 |
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| Symbol | |
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| ID | 4921840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1031000 |
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| End bp | 1031674 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162440 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001093038 |
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| Protein GI | 127511841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.685511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAGTA ACCAGAAACT CGTCGCGGCA ATCTTGGCCG GTTCGACACT ATTTATTTCG
GCTTGTCAGA CAACTAATCC GTATACCAAC GAAAGCCAGA ACGCCAAGGC GACTAACGGC
GCCATCATAG GTGCCATCGC CGGTGCTGCT ATCGGTGTGG CCTCGTCAAG CAAGAGCGAC
CGGGGTAAGG GTGCACTGAT CGGTGCCGCC TCAGGCGCAG CCGTTGGTGG TGGTATCGGC
TATTACATGG ACGTGCAGGA AGCCGAGCTA CGTAAGCAGC TACAATCGAC TGGCGTCAGC
GTGACCCGTA ACGGCGACAA CATCATCCTT AACATGCCAA ACGAAGTGAC CTTCGGTGTC
GATCAATCTG TGCTGAGCAG CCGTGCCAAG AACGTGCTGG ACAGTGTCGC CTTGGTCGCC
AAGGAGTATG ATGAAACCAT GCTGAATGTC ATGGGCTTCA CCGATAGCTC TGGCAGCGAG
TCATACAACC TGCGTCTGTC TCAGGTACGT GCGGCAGAAG TTGCCAACTA CCTGATGTCT
CGTGAAATCA AGAGCCAGCG CATCAGCTCT GTGGGCATGG GTGAGTCTCG TCCAATCGCC
GACAACTCGA CCCAGCAAGG CCGCGCGCAA AACCGCCGTG TCGAGATCGT GCTAAGCCCA
ATGTCACAAG GCTAA
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| Protein sequence | MISNQKLVAA ILAGSTLFIS ACQTTNPYTN ESQNAKATNG AIIGAIAGAA IGVASSSKSD
RGKGALIGAA SGAAVGGGIG YYMDVQEAEL RKQLQSTGVS VTRNGDNIIL NMPNEVTFGV
DQSVLSSRAK NVLDSVALVA KEYDETMLNV MGFTDSSGSE SYNLRLSQVR AAEVANYLMS
REIKSQRISS VGMGESRPIA DNSTQQGRAQ NRRVEIVLSP MSQG
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