| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0905 |
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| Symbol | |
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| ID | 4920828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1026570 |
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| End bp | 1027754 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162437 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001093035 |
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| Protein GI | 127511838 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAA AACCCAGCGT TGCCTGTCGC CACCCCGAAG TGATCATGCT CTATGAGAAG
GAGGAGGATA TCTCGGGCGC CGCCAATATC ATTGCCGAGC AGGTCGACGA ATATCGCACC
GTGCCTGTGA CCCGGCTAGT GGGCGAGCAG ATAAAAGAGC ATAAGCCCTC GGTGATCCTT
TTTGCCATGA GCTCGGTGAA GCTCAGCATA GAGCTCTATA CCAAACTCCT GAAAAACCAG
CAGATCGCCT ACAGGCATTA CGCCATAGTG CTGTGCAAGA ACAAGGAGTC TGCCCTGGCC
TTTCGCAGCT GCATCAAGGG GGTGTTCGAC AACTACTTCG TCTACCTGCC CCTGTACGAG
AAGTTTCGTC TGAAGATGAT AGTCCACAAC GGACTGAGAC AGAGCCAGGG GGATGATCAC
TATGCAGGTC TGGATGACGA CCAGCTGGAG CGCATCGATA CCAACCTCGC CTCGCTCATC
GAGCTCAGTA GCCAGTGTAA GCGCCAGCTA CTGGATTCGG TCGACTCCTG CAAGGCGTCA
GTCGAACAGT CGACCGAGCA GCTCCCCCAT GGCAGTGAGG GCATGAGTCA CGACAAGGCG
CTGGTCAAGT CGCTGGCCAA ACAGCATATC GAGCCCCTAC TGACTCAGCT GGAGCTGGAG
ATCAAAGATG GGCTGGATCT CATTCTGGCG CAGCTCACCA GTCGCCATAG CGAGATCAAA
GACATTAAGC AGCAGGTGAT CGCCAAACAG CAAGCCAAGA TCCCGACCCA GGCCCTGGTC
AGCTCGCTGC TGGATGAACA GGAAGCCAAG CCCCCCAAGA AGAAGATCTT GGTGGTGGAG
GATAATCAGA TCTACCGGGA GATGATCGTC AAGGTGCTGG AGCAAGATGA GTATGATACC
GAGCAGGCCT GCGACGGTCT TACGGCCCTC AAGATGATCA AGGGTAACGA TTACGCCCTG
ATCCTGATGG ATCTCTACAT GCCTCATCTG GATGGCATCA ACACCACCAA ACAGCTCAAG
GCAGATAATG ACGGCAAGGA TATTCCCGTG GTGGCGCTGA CCAGCAACAA CAACCGTGAG
CTGATCAAGC GTTGGGCCCA GGTGGGACTG AAGGGCTATA TTCTTAAGCC CTCCAATCGC
ACCGAGATCC TTCAGGCGGT CAAGACCGCC ATCGAATATG GCTAA
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| Protein sequence | MTRKPSVACR HPEVIMLYEK EEDISGAANI IAEQVDEYRT VPVTRLVGEQ IKEHKPSVIL
FAMSSVKLSI ELYTKLLKNQ QIAYRHYAIV LCKNKESALA FRSCIKGVFD NYFVYLPLYE
KFRLKMIVHN GLRQSQGDDH YAGLDDDQLE RIDTNLASLI ELSSQCKRQL LDSVDSCKAS
VEQSTEQLPH GSEGMSHDKA LVKSLAKQHI EPLLTQLELE IKDGLDLILA QLTSRHSEIK
DIKQQVIAKQ QAKIPTQALV SSLLDEQEAK PPKKKILVVE DNQIYREMIV KVLEQDEYDT
EQACDGLTAL KMIKGNDYAL ILMDLYMPHL DGINTTKQLK ADNDGKDIPV VALTSNNNRE
LIKRWAQVGL KGYILKPSNR TEILQAVKTA IEYG
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