| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0903 |
|---|
| Symbol | |
|---|
| ID | 4921427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1024955 |
|---|
| End bp | 1025476 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640162435 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001093033 |
|---|
| Protein GI | 127511836 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.707414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGC ATCAGTTTGA TTCCCCCCAA GCCCCAGAGA TCAGCATACG TCACAGCACA
GATGGCGACA TAGAGGGGAT TTTTGCCCTC TATGGCCAGC GCAGCTGTTA TGCCGGCACC
CTGCAGCGTC CCTATCCGTC GCTGACCTTC TGGCAGAAGC GGCTGAAGGA TCTGCCGGAG
AACTGTTACA GCCTGGTGGC CGTGCGCGAG GGCAAGATTG TGGGCCAGCT CGGCATGGAG
GTCTATAGCA ATGCCAGGCG CAAGCACGTG GCCAACTTTG GCATGGCGGT ATGCGAGTCG
GCCCGCGGGC AGGGGATTGG CAGTGCCTTG CTGGGGGCCA TGATAGATCT GGCGACCAAC
TGGCTGGCGG TACGGCGCAT CGAGCTCGAG GTCTATACCG ACAACGAGGC TGCCGTCGCC
CTCTATAAAT CCCATGGATT CGAGATAGAA GGTGAGGCCA AAGATTACGC CTTTCGGGAT
GGCCGCTATG TGAATGCTTT CCTGATGGCC AGATGCTGCT AA
|
|---|
| Protein sequence | MAEHQFDSPQ APEISIRHST DGDIEGIFAL YGQRSCYAGT LQRPYPSLTF WQKRLKDLPE
NCYSLVAVRE GKIVGQLGME VYSNARRKHV ANFGMAVCES ARGQGIGSAL LGAMIDLATN
WLAVRRIELE VYTDNEAAVA LYKSHGFEIE GEAKDYAFRD GRYVNAFLMA RCC
|
|---|
| |