| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0900 |
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| Symbol | |
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| ID | 4920585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1020106 |
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| End bp | 1021281 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162432 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001093030 |
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| Protein GI | 127511833 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.461251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAG TGAAATTTGA TTGGCAAGAT CCACTGCAAT TCGATGCGTT GCTTAGCGAA
GATGAACGCA TGATCCGCGA CATGGTGCAC GACTATGCCC AAGAGAAGTT GATGACCCGG
GTATTGATGG CCAATCGCAA TGAGCATTTC GACCGTGAGA TCATGAATGA ACTGGGCGAG
CTCGGACTCC TGGGGGCGAC TCTGCCCGAG GCCTATGGCT GCGCCAACGC CAACTATGTC
AGTTATGGCC TGGTGGCCCG AGAGATTGAA CGGGTCGATA GCGGCTATCG CAGCGCCATG
AGCGTGCAGT CCTCCCTGGT GATGCACCCC ATCTATGCCT ATGGCAACGA GCAGCAGCGT
CAGAAATACC TGCCTAAGCT GGCAACCGGC GAGTGGGTGG GCTGTTTCGG TCTGACCGAG
CCGGATGTGG GCTCGGATCC CGGTGGGATG AAGACCCGCG CCGAGCGTAT CGACGGCGGC
TATCGTCTCA ACGGTGCCAA GATGTGGATC ACTAACTCGC CTATCGCCGA TGTGTTTGTG
GTGTGGGCCA AGCTCGACGG GGTGATCCGT GGCTTCATCC TAGAGAAGGG GATGAAGGGG
CTGAGCGCAC CTAAGATTGA GGGTAAGTTC AGCCTTAGAG CTTCGATCAC CGGCGAGATA
GTGATGGACA ATGTCGAGGT GGGTGAAGAG GCGCTGCTGC CTAACGTTGA GGGACTCAAG
GGGCCGTTCG GCTGTCTCAA CAAGGCCCGC TACGGCATCG CCTGGGGCGC ACTGGGGGCG
GCAGAGTTTT GCTGGCACGC GGCGCGTCAA TACAGCCTGG ACCGTATTCA GTTTAACCGC
CCACTGGCGG CCACTCAGCT GATCCAGAAG AAGCTGGCCG ACATGCAGAC AGAGATCACC
ACAGGCTTGT TTGCCTGCCT GCAGGCCGGT CGCCTGATGG ATCAGGACGC GTTGCCCGTC
GAGGCCATCT CACTCATCAA GCGTAACTCC TGCGGTAAGG CGCTGGAGAT CGCCCGTACC
TCCCGCGACA TGCATGGCGG TAACGGCATC AGCGACGAGT TCCATGTGAT CCGTCACGTG
ATGAACCTCG AGGCCGTCAA CACCTACGAG GGTACCCATG ATATTCATGC GCTCATCCTG
GGGCGTGCGC AGACCGGCAT TCAGGCCTTC GGGTAA
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| Protein sequence | MARVKFDWQD PLQFDALLSE DERMIRDMVH DYAQEKLMTR VLMANRNEHF DREIMNELGE
LGLLGATLPE AYGCANANYV SYGLVAREIE RVDSGYRSAM SVQSSLVMHP IYAYGNEQQR
QKYLPKLATG EWVGCFGLTE PDVGSDPGGM KTRAERIDGG YRLNGAKMWI TNSPIADVFV
VWAKLDGVIR GFILEKGMKG LSAPKIEGKF SLRASITGEI VMDNVEVGEE ALLPNVEGLK
GPFGCLNKAR YGIAWGALGA AEFCWHAARQ YSLDRIQFNR PLAATQLIQK KLADMQTEIT
TGLFACLQAG RLMDQDALPV EAISLIKRNS CGKALEIART SRDMHGGNGI SDEFHVIRHV
MNLEAVNTYE GTHDIHALIL GRAQTGIQAF G
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