| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0898 |
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| Symbol | |
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| ID | 4923832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1018026 |
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| End bp | 1018961 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162430 |
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| Product | MltA-interacting MipA family protein |
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| Protein accession | YP_001093028 |
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| Protein GI | 127511831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.436193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.432402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAATCT TTTGCTTAGA CTCCTGTTTG ACCCGATTTA GTGTATCTAT ACCCATGAAA
AACAAGCTGC TGACAAGCCT ACTTACCTCT TTGCTCCTCT GCTTTGCCGT GCAGGCCGAA
GAGCAGAAGG TTTGTCATAT GGATGATGAA TGTGTCGAAG TTGGTCAGTG GCAACTTGGT
CTGGCGCTGG GCTATGGTGA GCGTAGCAAT CCTGTTCGCG ACTACGACGA TATCCCCATC
TACCTGGCAC CTACCCTGGC CTACTATGGC GACAGATGGT TTTTCGACAA TGGCAATCTG
GGTTACACCC TGGCGGATGA GGAGCTATTT AGCGTCAACC TGACCACCAG CTTCAGCAGC
GACAGCGCCT ACTTCTACCG TTGGGACCCG TCGAACATCT TTATCTCTGG CACTAGCCAA
CTCAGCTCAA CACCATCGGC ATTTACCTCT CGTTTTCAAG CCTTTGGCGC CGAGCCCGAA
CCGGTATTTA ATGAGCTGGA AGACAGAAAA TTTACACTTC TTGGCGGAGC AGAAGCGTTT
ATTTACACAC CAATGGGTAT AATCAACCTC GCCCTGGCCC ACGATCTTTT CGACGTGCAC
TCCGGTATGG AGGCCAAGGT GAAGTGGCTC TACAACCTAT CATGGACCGA CTGGAAATTT
GAATTCGCCG CAGTGGCTAA CTGGAAGAGC GAAGAGATCA TCAACTACTA TTACGGCGTA
CGTCCAAGTG AGAACACCTA TTGGAGTGAA CGCTACCGTG CCGGTTCTGG CACTAATTTA
GGATTAGAAT TGACGACACA ATACATAATG AGTGAGCACT GGGAGTTGCT CTTCCTGGTA
CGCTATACCG ACTTGGCCGA TGAAATCACC GCCAGTCCGC TCGTCACTGA AAGTTACACC
AACACCTACT TTATCGGCAC TGCCTATAGG TTCTAA
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| Protein sequence | MVIFCLDSCL TRFSVSIPMK NKLLTSLLTS LLLCFAVQAE EQKVCHMDDE CVEVGQWQLG
LALGYGERSN PVRDYDDIPI YLAPTLAYYG DRWFFDNGNL GYTLADEELF SVNLTTSFSS
DSAYFYRWDP SNIFISGTSQ LSSTPSAFTS RFQAFGAEPE PVFNELEDRK FTLLGGAEAF
IYTPMGIINL ALAHDLFDVH SGMEAKVKWL YNLSWTDWKF EFAAVANWKS EEIINYYYGV
RPSENTYWSE RYRAGSGTNL GLELTTQYIM SEHWELLFLV RYTDLADEIT ASPLVTESYT
NTYFIGTAYR F
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