Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0895 |
Symbol | |
ID | 4923826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1015603 |
End bp | 1016886 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162427 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001093025 |
Protein GI | 127511828 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000439067 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.678719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACGAC TCTTCATCAG CCTATACCTG CTACTGAGCC TCAGTTTTCT CGGTATAGGC TGGACCTTAG ACAGCATCTG GCAAAACAAT GTCGACGATA GCGGTGTGCA GGATGCGCCG CTCATCGCCT TAGCCCAGCT GATCGGCAAC CTGCCTGAGA GCCAGCGCGA GGCGTTTCTC GCCGAGCTTA GTACCCAACA AAGCTATCCC CTCAGGCTAC TGCCTAAGGC TCAGGTGGCG GTCAACCTAG ACGACTCCCT CGCGCGCGAC AGCGTCTTGG TCACGGCGCC GGATGAACAA CACGAGCTGC ATTTTATCCA GGTGGATGAC CAGCAGATCC TGATGGCCGG CCCCATAGAG ATAGATCCCA GGGAGCAGCT GCGCGGCCTG TTTACCCTCT TCTTCTACCT CTCCCTGGCA CTGGTCGCGC TGATCTGGGT ATGGCCCCTG TCACGGGACC TCAAGACCTT GCGCCTGGCG ACCAAGGCAT TTGGCCAGGC CAAGTGGGAC ACCCAAATTC AACTCTCCAG CCGCTCTCAG GTGCAGCCGC TGGCCAGCAC CTTCAACGAG ATGGCGCGCC ACATCAGCGC CCTGATAGAG AACCAGAAGC ATCTCTCCAA CGCCGTCTCC CACGAGATAA GAACGCCTCT GGCCCGGCTC AAATTTGCCC TGGCCCTGGT GCCCCAATAC TGCGCGCCGG ACTCTGATCC CGCTCAGCGA CAGGCGTTTC TCGACGAGAT GCAGCAGGAT GTCAAAGAGA TGGAGACCCT GCTGCAGGAG CTGCTGACCT ACGCCAGCCT GGAGTCTCAG CAGCAAGATC TGGAATTTGA GTGCTGCGAG CTGACCCGGC TTACCCAGCA GACCATCAGC CGGCTGCAAA ATCGCCACAG CATTCCGATT TATTTTGACG AGCAGACACC TGAGCTGAAG GTGATGGGCG ACCCGTCACT CATCGAGCGG GCACTGCAAA ACCTGATCAT CAACGCCCAG CGTTTCGCCC AAAGTCATAT CACTATCGCC ATCCGTCAGG ACAACAAATC GGTACAGCTA GAGGTGATGG ACGATGGCCC GGGCATCGCC GCCGTGGATC AGGAGAAGAT CTTCGAGCCC TTCTATCGCA GCAAGGTGGT GCAGAACGGC AACAAGGGTC ATGGCCTGGG ACTGGCCATC ATCAAACGGA TCATGCACAA ACACAATGGC CGGGTGTCGC TGGCCAGCGA GCCTGGCAAT ACTGTATTTA CCCTGAGCTG GCCCAGGGTG AGCGCGAACA GACTAAGAAA ATAG
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Protein sequence | MKRLFISLYL LLSLSFLGIG WTLDSIWQNN VDDSGVQDAP LIALAQLIGN LPESQREAFL AELSTQQSYP LRLLPKAQVA VNLDDSLARD SVLVTAPDEQ HELHFIQVDD QQILMAGPIE IDPREQLRGL FTLFFYLSLA LVALIWVWPL SRDLKTLRLA TKAFGQAKWD TQIQLSSRSQ VQPLASTFNE MARHISALIE NQKHLSNAVS HEIRTPLARL KFALALVPQY CAPDSDPAQR QAFLDEMQQD VKEMETLLQE LLTYASLESQ QQDLEFECCE LTRLTQQTIS RLQNRHSIPI YFDEQTPELK VMGDPSLIER ALQNLIINAQ RFAQSHITIA IRQDNKSVQL EVMDDGPGIA AVDQEKIFEP FYRSKVVQNG NKGHGLGLAI IKRIMHKHNG RVSLASEPGN TVFTLSWPRV SANRLRK
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