Gene Shew_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0894 
Symbol 
ID4920615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1015252 
End bp1015524 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content56% 
IMG OID640162426 
Producthypothetical protein 
Protein accessionYP_001093024 
Protein GI127511827 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000427519 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.844163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TAGAGTTTTT CGAGATCCCC AGTCCCTGTA TTGGTGTCTG TCAGACAGAC 
GCCAGGGGCT ATTGCAAGGG CTGCCTGCGT AGCAGAGACG AGCGCTTCAA CTGGCTGAAC
TTCTCTGACG CCCAGAAAAA TGAGGTGATT CGCCTGTGTA AGCAGCGCCA TCGCCGTCGT
CGCCTGGCCC TGTTAAAGGC GAAGAAGACG GCTATCCTGG AGGAGCGTGC CGCCGCGACC
CAATCGCTGG ACTTTGATAT CGATGCCGAA TGA
 
Protein sequence
MEQLEFFEIP SPCIGVCQTD ARGYCKGCLR SRDERFNWLN FSDAQKNEVI RLCKQRHRRR 
RLALLKAKKT AILEERAAAT QSLDFDIDAE