| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0882 |
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| Symbol | |
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| ID | 4922678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1001547 |
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| End bp | 1003868 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162415 |
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| Product | organic solvent tolerance protein |
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| Protein accession | YP_001093013 |
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| Protein GI | 127511816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000270887 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.785369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCC GTTACTTATT GGCATTGGCG CTACTCCCGC AGCTAGTCTT GGCAGACGAA
TCGGAAACCA CTCCCGCGCC CGGTGCCCAG TGTCTGGTGC TCCCGCCTGT TCCCATTCCT
GAGCCCAGCG CAGACGAACG TCCCCTAGAT CTGCAGCAGA TTAAGATCGT TTCCGACTCA
TCGGCAGCTA AGATGGGTGA CAAGGCCAGT TTCCAGGGAG ATGTGACATT CAGCCAGGGC
GGACGCCATA TCGCCGCCGA CAGCGCGGTA CTGGATCAGG CTAACGAGCG CCTAGATGCC
AACGGCAACC TGGTGTTCCA GGACAATATG TTTACCGTCA CGGCCGACTC TCTCAGCGCC
GAGATGCGCA GCAACAGCGC CCAACTTAAG GGTGCCCAAT ATTGGCTCCA CGGTCAGCAG
ATCCACGGCG AAGCGGAAAA CCTGGAGATC ACCCAGGACA ACAACCTGCA CCTGTCGAAC
ACCAACTTCA CGACCTGTCC GCCGGGCGAT AGCTCATGGC TGCTGGAAGC CGAGACCATC
AAGATAGACA GCAGCGAAGA GTGGGGCGAG CTTTGGGATG CCAAGCTCAA GATAGGCGAT
GTGCCCGTCT TCTATCTGCC CTACATGACA ATTCCCGTGT CGGAGAAGCG TAAGTCAGGC
TTCCTGTTCC CCTATTTCAG CACCAGCACC ACCAATGGTG TCGAGGTAGC GACCCCCTAC
TACTGGAACA TAGCGCCAGA GTATGATCTC ACCTTTACTC CGCACTATAT GTCGGCCCGC
GGACTGTTCC TCAAGTCGGA ATTTCGCTAT CTCGCCGGTG AGGCCCAGCA GGGGCAGCTG
AATGTGGAAT ACCTGAGCAA TGACGATCTG GTGCCCAACC GCGCCGACCG TTACCTCTAC
CACTGGGAGC ATCAGGGGGC CATCGCCGAC AACTGGCGGG TACTGGCCAA CTTTACCGAT
GTGTCGGACA ACAACTACTT CAACGATCTG CCCTCAGACG TGCTGCGCGC CACCGACAAC
CAGCTCTCTC GCATAGGCGA AATCGCCTAT TTCGAAGATA ACTGGGACAT GTCTGCCAGA
GTGCAGGATA TCAAGGTATT GGGTGAAGAA GAGTCTCCCT ATCAGGTGAT GCCGCAGATA
GGCTTTAACT ATCGCGCCCC AGGTTTCTGG CAAGGCTTGG ACTTCAATCT CATGGGAGAA
GCCAGCAACT TCCGCCATAA GGAAGATCAA TATGCTACCG CCAGCCGTCT GCACTTCGAG
CCCAGTGTCT CACTACCGAT CCACGGGCCG GCCGGATCGC TGACCAGTGA GCTTAAGCTT
CTGCAGACCA ACTACTGGCA GGACACCAAG AACTACACTG GCACTCAGCC GCTGGACAGC
TCGGTGAGCC GTACCCTGCC CCAGGTGCGT ATCCACGGTC AGATAAACTT CGAGCGTTTC
ACCGACTACT TCGATGCCAA CTATCGTCAG ACTCTGGAGC CACAGTTCCA GTATCTGTAT
GTCGGCTATG AGGATCAGTC CAACATCGGC ATCTATGACA CAGCGCTGCT GCAGGAAGAC
TACTACGGCC TCTTCAGGGA TCGCCGCTTC TCGGGTCTGG ACCGTATCGC CGACGCCAAC
CAGATGACAC TGGGTTTAAC GACCCGTCTG TTTGACGACC ATAACCTCGA GCGCTTCAAG
TTCAGCCTGG GTCAGATCTA CTACTTCGAG GACAGCAAGG TTGGCATTAC AGATCCTTCC
CGTCCCAACG AGATCTTTAA GCAGGAAAAT ACCTCAAACT CAGTGCTGGC AGCAGAGCTC
AACACTCAGC TCTACAGCGA TTGGTTCTTA AGCGGTGCCA TTCAATATGA CACCAAAAAC
AGGAACAACA AGAAGAGTGA GGTCACCCTG GATTTCCGCC CCGGGGTCAA CAAGCTGTTG
CAGCTCAGCT ACCGTTATGT GCCCGATTTA GTTAACAGCA ACACCAACGA ATCTGTTAAT
GTGTCGCAAA CCGGCTTGCG TACGGCTTGG CCGATCAACG ACAACTGGTA TATCGTGGGC
AACTGGTATT ACGATCTCAA TGAGAAACGT AGCGTCGAGA CCTACACAGG ATTTCAATAC
GAATCTTGTT GCTGGGCGGT GCGCTTAAGT TATCATTACC GCATTAAAAC CAACTATGTT
GACAACCTGG ATCCCACGTT CAACGACAGG GAGCTGTTCG AAAGCGGCTT CTACCTGAAC
TTTGTGATCA AGGGATTAGG GGGTTCCGGC CCGCTTGGGG TATCGGACAT GCTTAACGAT
GGCCTGTTTA ACTATCGCAA GCCGCTCTAC CTGAAAAACT AG
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| Protein sequence | MHIRYLLALA LLPQLVLADE SETTPAPGAQ CLVLPPVPIP EPSADERPLD LQQIKIVSDS
SAAKMGDKAS FQGDVTFSQG GRHIAADSAV LDQANERLDA NGNLVFQDNM FTVTADSLSA
EMRSNSAQLK GAQYWLHGQQ IHGEAENLEI TQDNNLHLSN TNFTTCPPGD SSWLLEAETI
KIDSSEEWGE LWDAKLKIGD VPVFYLPYMT IPVSEKRKSG FLFPYFSTST TNGVEVATPY
YWNIAPEYDL TFTPHYMSAR GLFLKSEFRY LAGEAQQGQL NVEYLSNDDL VPNRADRYLY
HWEHQGAIAD NWRVLANFTD VSDNNYFNDL PSDVLRATDN QLSRIGEIAY FEDNWDMSAR
VQDIKVLGEE ESPYQVMPQI GFNYRAPGFW QGLDFNLMGE ASNFRHKEDQ YATASRLHFE
PSVSLPIHGP AGSLTSELKL LQTNYWQDTK NYTGTQPLDS SVSRTLPQVR IHGQINFERF
TDYFDANYRQ TLEPQFQYLY VGYEDQSNIG IYDTALLQED YYGLFRDRRF SGLDRIADAN
QMTLGLTTRL FDDHNLERFK FSLGQIYYFE DSKVGITDPS RPNEIFKQEN TSNSVLAAEL
NTQLYSDWFL SGAIQYDTKN RNNKKSEVTL DFRPGVNKLL QLSYRYVPDL VNSNTNESVN
VSQTGLRTAW PINDNWYIVG NWYYDLNEKR SVETYTGFQY ESCCWAVRLS YHYRIKTNYV
DNLDPTFNDR ELFESGFYLN FVIKGLGGSG PLGVSDMLND GLFNYRKPLY LKN
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