| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0881 |
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| Symbol | |
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| ID | 4920578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1000116 |
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| End bp | 1001420 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162414 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001093012 |
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| Protein GI | 127511815 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000301767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.688163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCT GTAAACAACT GATTTTTGCT TTACTTACAC TGGCGATGAG CCACGGCGCG
ATGGCCGAGA ACGTACCCCT GGATAGGGTG ACGGTTCAGA TCAACGAAGG CATAGTGCTG
GAAAGCGAAA TCGTCAACAT GTTGAAGACA GTCAAAGCCA ACGCAAAAGC CGCCGGCCAG
TCATTACCTT CTGACAAGGC GCTGCGCACT CAGGTGATCG AGCGTCTGAT CGTGACCCGT
CTGCAACTGC AAATGGCCGA CCGCATCGGC CTGCATATCG GTGACCTGCA ACTGGACCAG
ACAATCGAGA ACATCGCCAA AGAGCAGAAG ATGACTCCTG AGATGATGCG CGAAAAGGTC
GAGGCCGAAG GCATGAGCTG GAGCCAGTAC CGCGAGCAAC TGCGCGAAGA GATCACCTTG
GGCGAGATCC AGCGTATTCA GGTACAGCGT CGTATCCAGG TCTCTCCACA GGAGATCAAC
AGCCTGGTTA AGCTAATCGA AGAGCAAGGG ATGCAGCAGG TGGAGTACCA GATCGGTCAT
ATCCTGATCG AGGTGCCCAA CAGCCCTAAC AGCGAACAAC TTGAAGCCGC CAGCAGCCGT
GCCAATGCCG TGCTCAAGCG CCTACAAGAC AATGCCGACT TCAAACAGAC CGCCATCGCC
TCCTCTTCTG GCCCTAAGGC GCTGGAAGGC GGTATCTGGG ATTACATGAA CGTCAATGAG
ATGCCAACCC TGTTCGCCGA GCTTTTAGTC GGTGCCAAGA CGGGTGACAT CATAGGCCCT
GTGCGCAGCG GCGCCGGTTT CCACATCATC AAGGTGATGG ATGCCCGCGG CCTGCAGACC
AAAGAAATTG ACGAAGTACG TTCACGTCAT ATACTGATCA AGCCGTCGCC TATCCTGTCG
GAAGAGCGCG CCAAGGCGAT GCTAGACAAG TTTGCGGCCC AGCTAAGACG CGGCGAAGCC
GACTTTGCCA CCCTGGCCCG TCAATACAGC GAAGACCCAG GTTCGGCGGC CAAGGGCGGC
GAACTGGGCT GGGCAGATCC TACCGTCTAC GTACCTGCCT TCGCACAAAC ATTGGGCGCA
CTGAAGATCA ACGAGATCAG TGAGCCATTC CGTTCTAGCC ACGGCTGGCA CATAGTGCAG
CTGGAGGAGA GACGTAAGAC GGATGCGACA GATAAATTTA ACACTAATCG GGCGCACCAG
CTCATCTTCC GCCGCAAGTT TAATGAAGAA TTACAAAACT GGCTGGATGA AATGCGAGCA
GAGGCTTACA TTGAAGTATT CGATGCCGAT TTCAATCGAG GTTAA
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| Protein sequence | MKPCKQLIFA LLTLAMSHGA MAENVPLDRV TVQINEGIVL ESEIVNMLKT VKANAKAAGQ
SLPSDKALRT QVIERLIVTR LQLQMADRIG LHIGDLQLDQ TIENIAKEQK MTPEMMREKV
EAEGMSWSQY REQLREEITL GEIQRIQVQR RIQVSPQEIN SLVKLIEEQG MQQVEYQIGH
ILIEVPNSPN SEQLEAASSR ANAVLKRLQD NADFKQTAIA SSSGPKALEG GIWDYMNVNE
MPTLFAELLV GAKTGDIIGP VRSGAGFHII KVMDARGLQT KEIDEVRSRH ILIKPSPILS
EERAKAMLDK FAAQLRRGEA DFATLARQYS EDPGSAAKGG ELGWADPTVY VPAFAQTLGA
LKINEISEPF RSSHGWHIVQ LEERRKTDAT DKFNTNRAHQ LIFRRKFNEE LQNWLDEMRA
EAYIEVFDAD FNRG
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