| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0879 |
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| Symbol | ksgA |
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| ID | 4920810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 998300 |
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| End bp | 999109 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162412 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_001093010 |
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| Protein GI | 127511813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.865136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA AAGTACATTT AGGCCACACG GCGAGAAAAC GTTTCGGACA AAACTTTTTG
ACCGACAGCA ATGTGATCAA TCGTATCGTC GGCGCCATCT CGCCCGATAA CGATCACGTG
ATGGTCGAAA TTGGCCCAGG CCTGGCGGCG CTTACCGAGC CGGTAGCCGA AAGCATCGAC
AAGCTGACCG TGGTCGAGCT GGATAAAGAT CTGGTTGAGC GTCTGCAGAC ACATCCGTTT
CTCAAGGACA AGCTGGAGAT CCACCAGGGC GACGCGCTGA AATTCGACTT CAAGCAGCTG
GTCGAAGAAG GCAAGCAGAT GAAGGTGTTT GGTAACCTGC CCTACAACAT CTCTACACCG
CTGATGTTCC ACCTGTTTGA GTTTGCAGAG CATATTGAGA ATATGCACTT CATGCTGCAA
AAAGAGGTGG TACTGAGACT CTCTGCCGCA CCCGGTACCA AAGCCTATGG CCGTTTGACC
GTGATGGCGC AATATTTCTG TCAGGTAATG CCGGTACTCG AAGTGCCACC AGGCTGCTTC
ACACCGCCGC CAAAGGTCGA CTCTGCCGTG GTGAGACTCG TGCCCTACAA GGAGAAGCCT
TACCCCTGCA AAGATGTGGA TCTGCTAAGA CACCTGTGTA CCACGGCCTT TAACATGCGC
CGTAAGACAC TGCGTAACAA CCTCAAGCAG CTGTTGAACG ATGACGACTT CAGCGCGCTG
GGCATAGATG CCAGCATGCG CCCTGAGCAG ATCACTGTGC AGCAATATGT CGCCATGGCC
AACCATCTGG TCGATAAACG CCAAGCCTAA
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| Protein sequence | MSNKVHLGHT ARKRFGQNFL TDSNVINRIV GAISPDNDHV MVEIGPGLAA LTEPVAESID
KLTVVELDKD LVERLQTHPF LKDKLEIHQG DALKFDFKQL VEEGKQMKVF GNLPYNISTP
LMFHLFEFAE HIENMHFMLQ KEVVLRLSAA PGTKAYGRLT VMAQYFCQVM PVLEVPPGCF
TPPPKVDSAV VRLVPYKEKP YPCKDVDLLR HLCTTAFNMR RKTLRNNLKQ LLNDDDFSAL
GIDASMRPEQ ITVQQYVAMA NHLVDKRQA
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