Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0877 |
Symbol | apaH |
ID | 4924286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 997017 |
End bp | 997841 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162410 |
Product | diadenosine tetraphosphatase |
Protein accession | YP_001093008 |
Protein GI | 127511811 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAT ACTTCGTGGG CGATATTCAG GGCTGTTTCG ATGAGCTCCA TGTCCTGCTG GCCAAGGTGG ACTTTAACCC TTCCAAAGAT GAGCTCTGGG TGGTCGGCGA CATGGTGGCC AGGGGCACCC AATCGCTGGA GACGCTGCGT TACCTCAAGG GGCTTGAGGG CTCGGTAAAA CCTGTGCTGG GCAATCACGA CCTGCACCTG ATGGCGCTGC ATGGCAAGGT GAAACGGGTC AACCCCAAGG ATAACCTGGG CGCCCTGTTA GCGGCGCCGG ATCTCAACCA GCTCATCGAT TGGCTCAGGC TACAGCCACT GGCCCGGGAA CATAAAGCCC ATTCTGTCTT GATGGCTCAC GCCGGCATTC CGCCCCAGTG GGACGTTAAA ACCGTCCTCA AGGAGTCGCG CAAGGTACAG GAGGCACTGG CAAGAGATGA CTATATCGAG CACCTCATCG CCAAGATGTA CACCAACTCC GTCAGCGAAT GGTCACCCGA GACCAAGGGA CTCAAGCGCC TCGTCTATAC CATCAACGCC CTCACCCGGA TGCGCTTTCT CCACAGCGAT GGTCGATTAA ACTTCGATTG TAAGCTGCCG CCAGCGAAAG GCGAGAAGGA AGGCTTGATC CCCTGGTTTA AACAACCAGG CCGGGCCATG AAAGGCCATA CTTTGGTCTT CGGCCATTGG GCGGCCCTGA TGGGAGAGGT GAACCAACCT GGGCTGCAGG CGCTGGATAC CGGATGCTGC TGGGGACAAT ATTTAACCCT CTGGCATCTT GAATCGAATC AAAAAATTAC CCAAAATAAG TTAAAAAAGA GTTAA
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Protein sequence | MATYFVGDIQ GCFDELHVLL AKVDFNPSKD ELWVVGDMVA RGTQSLETLR YLKGLEGSVK PVLGNHDLHL MALHGKVKRV NPKDNLGALL AAPDLNQLID WLRLQPLARE HKAHSVLMAH AGIPPQWDVK TVLKESRKVQ EALARDDYIE HLIAKMYTNS VSEWSPETKG LKRLVYTINA LTRMRFLHSD GRLNFDCKLP PAKGEKEGLI PWFKQPGRAM KGHTLVFGHW AALMGEVNQP GLQALDTGCC WGQYLTLWHL ESNQKITQNK LKKS
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