Gene Shew_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0875 
Symbol 
ID4924140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp994392 
End bp994784 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content52% 
IMG OID640162408 
Producthypothetical protein 
Protein accessionYP_001093006 
Protein GI127511809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.535908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT TACCGACTAC GTTAGCTGTG GTGATTGCAG CCTCTGTTTA TACCGTTCCA 
GCACCAGTTC AAGCCAACGA TCAACTCGTT GCCAACATCT GTAACTATGT TCAGGCCGAT
GATAAAAACC GTTTACGTAA GAAATTGAAA GAAGCGCGCG TTAAGCTACG CAACGTGTAC
GAAGGGGTGA CCTGTGACGG CAACAGCCTG CTGCGTTTCG CCATGATTAG CGGTGCCAAC
GACGTGGGCG AGTTCATGAG TAAGCGTCTC TCCACCGAAG AGTTGAGTGT CAAGGAAGCC
GATGGTCTGA CGGTCGTCGA ATGGGCCGAG GGTAACGGCC ACGGTGGTAG CCCAATTACC
GCGGCAATCA AGGAACGCCT CGCAGGCAAT TAA
 
Protein sequence
MRFLPTTLAV VIAASVYTVP APVQANDQLV ANICNYVQAD DKNRLRKKLK EARVKLRNVY 
EGVTCDGNSL LRFAMISGAN DVGEFMSKRL STEELSVKEA DGLTVVEWAE GNGHGGSPIT
AAIKERLAGN