| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0865 |
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| Symbol | |
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| ID | 4920664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 986821 |
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| End bp | 987279 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162398 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001092996 |
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| Protein GI | 127511799 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.151953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA ATAAGATAAT TAATATCGAC AACCTTTGCT GGGAATCTTG GCAACACTCA
GATCGATACG CCAGCCATCA AAAACATATC GGCGATGCCG CCGGTTGTCA GCAGATCGGC
GTCACCATGG AACGACTGGA ACCCGGCAAG CTCTCCTCCG TCGCCCACTA CCACACCAAG
GAAGAGGAAC ACCTCTACGC ACTGCAAGGT GAAGCCACCC TGTATATCGA CGGCGAGCCT
CACCCCTTTA AGCAGGGCGA CTATATCTGT TTTACTGCAA ATTCAGGCAT CTCCCATACC
CTGAAAAACG AATCCGAAGC CGACTTCCTG TTTCTGGTGC TGGGCAATCG CGATCCCCAC
GATGTGGTGG TGTACCCAGA GCATAATAAG GTGCAGGTGC GCTCCATCGA CGAGATCTAT
GCCAAGCGCC CCACCAACTA CTGGGATCCC GACCGTTAA
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| Protein sequence | MNNNKIINID NLCWESWQHS DRYASHQKHI GDAAGCQQIG VTMERLEPGK LSSVAHYHTK
EEEHLYALQG EATLYIDGEP HPFKQGDYIC FTANSGISHT LKNESEADFL FLVLGNRDPH
DVVVYPEHNK VQVRSIDEIY AKRPTNYWDP DR
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