| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0864 |
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| Symbol | |
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| ID | 4920653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 985762 |
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| End bp | 986706 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162397 |
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| Product | Dyp-type peroxidase family protein |
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| Protein accession | YP_001092995 |
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| Protein GI | 127511798 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2837] Predicted iron-dependent peroxidase |
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| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.746492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGTC TGGTTATGCC ACGTGAACAG CTGGGTGTGT GTGCCGAAGG AAATTTACAT
AGCGTGTATC TGATGTTCAA CGCCAACGAC GGCGTCGAGT CTCAGCTGCG TCCCTGCGTC
GCCAATGTCG CACAGTATAT CTATGAATTG GCCGACCAGT ATGCCGACAG CGCCTTCAAC
GGTTTCGTGG CCATAGGTGC CAACTACTGG GATAGCCTGT ATCCAGGGCG TCGTCCTTCA
CAGCTCAAGC CTTTCCCGGC CATGCATGCC GATAATCGTG ATGCACCAGC CCATGAGTAT
GATCTTTTCG TGCATCTGCG CTGCGATCGT TATGACATCT TGCATCTGGT GGCCAACGAA
GTGTGCCAGA TGTTTGAAGA TTTGGTTGAG CTGGTGGATG AGGAGCGCGG ATTCCAGTTT
ATGGATACCC GGGATCTAAC CGGATTTGTC GATGGCACAG AGAACCCTAA GGGACGTCAT
CGTCAGGATG TGGCCTTGGT GGGCGACGAA GACGAGTATT TCCGTGGCGG CAGTTATATT
CATGTGCAGA AGTTTGCCCA TAACCTCAGT AAGTGGAACC GTCTGCCGCA GAAGAAGCAG
GAAGATATCA TAGGCCGCAC CAAGATAGAC AATATCGAGT ATGCCTCTGA GGACAAGCCG
CTTACCAGCC ACATCAAGCG GGTCAATCTG AAGGATGCCG ACGGTAAGTC GATGGAGATC
CTGCGTCAGA GTATGCCTTA CGGGTCGATG AAGGAGCAGG GGCTGATGTT TATCTCAGTC
TGTCGCAACT CGGTACATTT CGAGAAGATG TTGAGCAGTA TGGTTCATGG CGACGGCGAG
GGGAATCACG ATCACCTGAT GCACTTTACC CAGGCACTGA CAGGCTCGGC ATTCTTTGCC
CCGTCGCTTG ATTTCATGGA GCGAGAGGCA GAATTTGAGG ATTAA
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| Protein sequence | MDSLVMPREQ LGVCAEGNLH SVYLMFNAND GVESQLRPCV ANVAQYIYEL ADQYADSAFN
GFVAIGANYW DSLYPGRRPS QLKPFPAMHA DNRDAPAHEY DLFVHLRCDR YDILHLVANE
VCQMFEDLVE LVDEERGFQF MDTRDLTGFV DGTENPKGRH RQDVALVGDE DEYFRGGSYI
HVQKFAHNLS KWNRLPQKKQ EDIIGRTKID NIEYASEDKP LTSHIKRVNL KDADGKSMEI
LRQSMPYGSM KEQGLMFISV CRNSVHFEKM LSSMVHGDGE GNHDHLMHFT QALTGSAFFA
PSLDFMEREA EFED
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